Thiomicrorhabdus sediminis: FE785_05435
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Entry
FE785_05435 CDS
T05983
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
thig
Thiomicrorhabdus sediminis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thig03032
]
FE785_05435
03036 Chromosome and associated proteins [BR:
thig03036
]
FE785_05435
03400 DNA repair and recombination proteins [BR:
thig03400
]
FE785_05435
DNA replication proteins [BR:
thig03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FE785_05435
Chromosome and associated proteins [BR:
thig03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FE785_05435
DNA repair and recombination proteins [BR:
thig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FE785_05435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QCU90111
UniProt:
A0A4P9K5M8
LinkDB
All DBs
Position
1191276..1191581
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AA seq
101 aa
AA seq
DB search
MTKSELIELIARKQTQFAQKDVEIAVNQIVDSMIDTLSKGERIEIRGFGSFSLHHRKARV
GRNPKTGETVELSDKRVPHFKPGKALRERVDDSKDTTDILQ
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgatcgaacttattgcaagaaagcaaactcagtttgctcaaaaa
gacgttgaaattgcggttaatcaaatcgtggactcgatgatagacaccttgtcaaaaggt
gagcgtatcgagattcgcggtttcggtagctttagccttcatcacagaaaggcacgtgtt
ggacgtaatcctaaaaccggtgaaacggtagagttgtctgacaagcgtgttcctcatttc
aagcctggtaaggctttgcgtgagcgagttgatgattcaaaagatacaaccgatattttg
cagtaa
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