Thiomicrorhabdus sediminis: FE785_05780
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Entry
FE785_05780 CDS
T05983
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00541
Biosynthesis of various nucleotide sugars
thig01100
Metabolic pathways
thig01250
Biosynthesis of nucleotide sugars
Module
thig_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FE785_05780
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
thig01005
]
FE785_05780
Enzymes [BR:
thig01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
FE785_05780
Lipopolysaccharide biosynthesis proteins [BR:
thig01005
]
Lipid A
FE785_05780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QCU90171
UniProt:
A0A4P9K5T1
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All DBs
Position
complement(1253850..1254689)
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AA seq
279 aa
AA seq
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MKLCGFNVGIDQPFFLIAGPCVIESEQLAIDTAGQLKEMTEKLDIPFIFKSSYDKANRSS
TASFRGLGIEEGLRILQKVKDEVGVPVLTDVHEDTPLDEVASVVDVMQTPAFLVRQTNFI
QNVCRQGLPVNIKKGQFQAPWDMNQVVAKAREVGNDNIMVCDRGTSFGYNTLVSDMRGLA
SMRSTECPVVFDATHSVQQPGGQGTTSGGQREMVPVLARAAIAAGVSGVFMETHPDPQKA
LSDGPNMWPLGQLEPLLETLKALDSVVKERGFIEDNFSL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatgtggttttaatgtcggaattgatcaaccgttttttttgattgccggtcct
tgtgttattgaatctgaacaactggcgattgatactgccggtcagctaaaagagatgacc
gagaagttggatattccttttattttcaaatcgtcatacgataaggctaaccgttcttct
accgcaagttttcgtggtttaggaattgaagaaggcttgcgtattctacaaaaagtgaag
gatgaagtcggtgtgccggtattaaccgatgtgcatgaagataccccgttggatgaagtt
gcctcggtggttgatgtgatgcagaccccggcgtttttggttcgtcaaaccaatttcatt
caaaacgtctgtcgccaaggtttgccggtcaatattaaaaaaggccagttccaagcgcct
tgggatatgaatcaggtagttgctaaagcccgtgaagtcggtaacgacaacattatggtc
tgcgatcgtggtacatcattcggttataacaccttggtttccgatatgcgcggtttggcg
tcaatgcgttcaaccgaatgcccggtagtatttgatgcaacgcattctgtgcaacagcct
ggtggacaaggtacaacttcaggtggtcagcgagaaatggttcctgtgctggcccgagct
gcgattgcagctggagtgtcaggtgtgtttatggaaacgcaccctgatcctcaaaaagct
ctaagtgatgggcctaacatgtggcctttaggtcagcttgaaccgctactggaaacgtta
aaagcgttggactcagtagttaaagaacgtggatttatcgaagataatttctctctttaa
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