Thiomicrorhabdus sediminis: FE785_05875
Help
Entry
FE785_05875 CDS
T05983
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
thig
Thiomicrorhabdus sediminis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
thig03029
]
FE785_05875 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thig02000
]
FE785_05875 (bamA)
Mitochondrial biogenesis [BR:
thig03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
FE785_05875 (bamA)
Transporters [BR:
thig02000
]
Other transporters
Pores ion channels [TC:
1
]
FE785_05875 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
POTRA_1
YqfD
Motif
Other DBs
NCBI-ProteinID:
QCU90189
UniProt:
A0A4P9K5E5
LinkDB
All DBs
Position
complement(1273537..1275828)
Genome browser
AA seq
763 aa
AA seq
DB search
MVNMSQQTFKNKVLSAAITSILFTPAIANAFTVNQIKVEGAKKIGQETVTSYLNVNKGSD
LDAQAIQDSIQRLYKTGFFQDVALFEGANGTLIVKVVERPSIAEITFEGNELIETEALTT
ALDTIGLKKGRVYNNAQLDQVIVDLKRRYQNQGYYAASIDIQTSEMDRDRVAIKVVINEG
EPATIGRINLVGNNIYSDDRLKAKMQMEEGGDDKYSKPKMEADIETIKSFYMDNGYADFK
VRSSQVSISADQTKVFTTINMTEGAQFKIDQVDYIGELIIGRDEVEQLVDVKAGDIFSRS
KIIDAVNKIRDRLSEEGYAFAEVAPETLIDRENNTISLNFKVEPKKRVYIRRIEIEGNTR
TRDHVIRREMRQMESAPYSLKSVRQSKERIQRLGFFLTSDVQTERVSEDQVDLIVKVEEQ
PTGSFTAGIGYSQVDGASFNVGVSERNFIGSGHQLDFKVASSAARKTADIGVTNPYFTED
GVSLGVGFYYSEIDATELDVADYTTNNLGVRTSLGYPISETDSLNYGLKFDNQDLVCANT
FTYCNDYVAQNGKSNSAVLFTMGWNHNSTNAFYFPTEGHKTSLSLEAAIPATTDAPFYKV
YASESWFTPISENFTLQLKTGLAFGDGYGELTELPFFERFYAGGIGSVRGFEPNSLGPQF
DYATDGSSSPAGGAVKFNGTVGIVSPVPLIEDSSNARITMFFDFGNVYTDFDAVDLAELR
AAVGLGVSWITPVGPLTFSLARAVATKEDDQLQNFQFTLGAGF
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggttaatatgtcgcagcaaacatttaagaataaagtcttatcagcagctatcacttca
attttatttaccccagccatcgcaaatgcttttaccgtcaatcagataaaggttgagggt
gctaaaaaaatcggtcaagaaaccgtcaccagttatcttaatgtcaataaaggctccgat
cttgatgcgcaagcgattcaagatagtattcagcgtttgtataaaaccggttttttccag
gacgtcgcgctttttgaaggtgctaatggcaccttgattgttaaggttgtcgagcggccg
tctattgccgagatcacttttgagggcaatgagcttatagaaaccgaagccttaacaacc
gccttggataccatcgggttgaaaaaaggtcgagtctataacaatgcgcaactggatcag
gttattgtcgatctgaaacgacgttatcagaaccaggggtactatgcggccagtatcgat
attcaaacctcggaaatggatcgtgaccgtgtcgctatcaaggtagtgattaatgaaggt
gagccagcaaccattggtcgtatcaacctggtaggtaacaatatttacagcgatgatcgc
cttaaagccaagatgcagatggaagaaggtggcgacgataaatattccaaaccgaaaatg
gaagccgatattgaaaccattaaatccttctatatggataacggttatgccgattttaaa
gtacgctcatctcaagtgagtatttccgccgaccagaccaaggtgttcaccactatcaat
atgaccgagggtgctcagtttaaaattgatcaggttgattatattggtgaattaatcatc
ggtcgtgatgaagtcgagcaattggtcgatgtcaaagcaggtgatatcttctctcgtagc
aaaattattgatgccgtgaataaaatacgtgatcgtttaagtgaagagggctatgctttt
gcggaagtcgctcctgaaactttgattgaccgtgaaaacaataccattagcctgaatttt
aaagtcgagccgaaaaagcgtgtttatattcgtcgtatcgaaatagaaggcaatacacga
acgcgtgatcatgttattcgtcgtgaaatgcgtcaaatggaaagcgcgccatattctttg
aaatcggttcgtcagtctaaagagcgaattcaacgtttagggttcttcctgacatcggat
gttcagaccgagcgtgtctcggaagatcaagttgacttgatcgttaaggtcgaagagcag
ccgaccggttcatttaccgccggtatcggttattctcaggttgatggagccagtttcaac
gtcggtgtatcggaacgtaactttatcggtagcggtcaccagcttgattttaaagttgcc
agtagtgcggcaagaaaaaccgccgatatcggcgtaaccaatccttactttaccgaagat
ggtgtgagtctaggggtcggtttctattacagtgaaatcgatgcgacagaattggatgtg
gccgactacaccaccaataaccttggtgtacgcacctcattgggttatccgatcagtgaa
accgattctctgaactatggtttgaaattcgataatcaggatttggtctgcgcaaataca
tttacctattgtaatgattatgtcgcccaaaacggcaagagtaatagcgcagtcttgttt
acaatgggttggaatcacaactcgaccaatgcgttttacttcccgacagaaggtcataag
accagcctgtctttagaggcggcgattcctgcaaccacggatgcgcctttttataaggtt
tatgccagtgaaagctggtttacaccgatcagtgaaaactttaccttacagttgaaaaca
ggattggcgttcggtgatggttacggtgagttgaccgaattaccgttcttcgagcgcttt
tatgccggtggtatcggctcggtgcgcggctttgaaccgaactcattagggccgcagttt
gattatgcgacagacggcagttcaagtcctgccggtggtgccgttaagtttaacggtacg
gtcggtatcgtttcaccagtacctttgattgaagattcaagcaatgcgcgtattaccatg
ttctttgattttggtaatgtttataccgatttcgatgcggttgacttggctgaattacgt
gcagcggttggattaggggtttcttggattacaccggtgggtcctttgacattcagtttg
gctagggcggttgccaccaaggaagatgaccagttgcaaaacttccagtttactttaggt
gcgggattctaa
DBGET
integrated database retrieval system
