Thiomicrorhabdus sediminis: FE785_05940
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Entry
FE785_05940 CDS
T05983
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00300
Lysine biosynthesis
thig01100
Metabolic pathways
thig01120
Microbial metabolism in diverse environments
thig01230
Biosynthesis of amino acids
Module
thig_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FE785_05940 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thig01002
]
FE785_05940 (dapE)
Enzymes [BR:
thig01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FE785_05940 (dapE)
Peptidases and inhibitors [BR:
thig01002
]
Metallo peptidases
Family M20
FE785_05940 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
QCU90201
UniProt:
A0A4P9K5W0
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All DBs
Position
1288120..1289250
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AA seq
376 aa
AA seq
DB search
MSETITLAQQLIQIDSITPEDKGCQHMIADYLSALGFNTEHMRFADVDNIWSRKGLDSPC
LVFAGHTDVVPTGPADAWTHPPFSAHIDGDIMYGRGTADMKSSIACFMVATKRFVKDHPD
HKGSIAYLITSDEEGPAINGTVKVVEALERRNEKFEYCLVGEPSSSHKLADSIKNGRRGS
LSGKLTVKGIQGHIAYPELADNPIHNLAPALEQLVQVQWDHGNEYFPPTSFQVSNINGGT
GATNVIPGDVEVLFNFRFSTEHSPESLQESVHAILDHHKLEYDLQWNLSGLPFITPADGE
LIQAVQQASENVLGYKPQLSTGGGTSDGRFIAPTGAQVIELGPINATIHKIDEQVSVADL
EKLTDIYYQTLVNLLT
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaccattacccttgcccaacaattgatccaaattgattcgatcacccctgaa
gacaaaggctgtcaacatatgattgctgactacctgagtgctttaggctttaataccgag
cacatgcgttttgccgatgttgataatatctggtcgcgcaagggactggactcaccatgc
ttggttttcgccggccataccgatgttgtacctaccggcccggctgatgcctggactcac
ccgccgttttcagcccacattgatggcgatatcatgtatggtcgcggcaccgctgatatg
aaaagctctattgcctgctttatggtggcgactaagcgttttgtcaaagaccatcctgat
cataaaggctcaatcgcctacctgatcaccagtgatgaagaaggcccggcaatcaacgga
accgtcaaggtagttgaagccttggaaagacgtaacgaaaaatttgaatactgcttagta
ggcgaaccttccagctctcataagctggcagattcgattaaaaacggacgtcgcggctcc
ttaagcgggaaactgaccgttaagggtattcaagggcatatcgcctacccggaattagcc
gacaatccgattcacaacctagcaccagcacttgaacaactggtacaggtgcaatgggat
catggtaacgaatactttcccccgacttcattccaagtgtctaatatcaatggtggcacc
ggcgcaaccaatgtgattccaggcgatgttgaagtacttttcaatttccgtttctcgacg
gaacacagtccagaatccttacaggaaagtgtccatgccatcttggatcaccataaattg
gaatatgatttgcagtggaacctatccggcttgccgtttattactcctgccgatggcgaa
ttgattcaagctgtgcaacaggcatcagaaaatgtactcggttacaaaccacaactttca
accggtggtggcacatctgatggccgttttatcgcaccaaccggtgcacaggtcattgag
ttgggaccgattaacgcgaccatccataagatcgatgaacaagtcagcgttgccgatttg
gaaaaattaaccgacatctattatcaaacactggttaacctgctaacctaa
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