KEGG   Thiomicrorhabdus sediminis: FE785_06360
Entry
FE785_06360       CDS       T05983                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
thig  Thiomicrorhabdus sediminis
Pathway
thig03030  DNA replication
thig03430  Mismatch repair
thig03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FE785_06360
   03430 Mismatch repair
    FE785_06360
   03440 Homologous recombination
    FE785_06360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thig03032]
    FE785_06360
   03400 DNA repair and recombination proteins [BR:thig03400]
    FE785_06360
Enzymes [BR:thig01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FE785_06360
DNA replication proteins [BR:thig03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FE785_06360
DNA repair and recombination proteins [BR:thig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FE785_06360
SSDB
Motif
Pfam: RNase_T RNase_H_2 CAF1 DEDDh_C
Other DBs
NCBI-ProteinID: QCU90276
UniProt: A0A4P9K7F8
LinkDB
Position
complement(1397966..1398622)
AA seq 218 aa
MFNTIKSWLNERRLNQQKAALKDDAYAYLFEPAQAGCFVCFDCETTGLDRNNDRIITLSA
VKIVGDEILTSQGLNLVVKQEQEIAEQSILVHQIRNIDVEDSKSAYATEQDAIKAFLAFI
RGATLVGYYLEFDVAMVNRVIKPWLGIELPNPKIEVSELYYLYARREAKRSCIEPNIDLR
FDSILKHLQLPNFGQHDAANDALMTALIFVKLQKMGLR
NT seq 657 nt   +upstreamnt  +downstreamnt
atgttcaacacgatcaagtcctggttaaatgaacggcgcctcaatcaacaaaaggccgcg
ctaaaagatgatgcctacgcttatctgtttgaaccggctcaagctgggtgctttgtctgc
tttgattgcgaaaccaccggtttagatcgcaataatgaccgtattatcactttaagtgcg
gtgaaaatcgttggcgatgaaattcttaccagtcaaggtttgaatctggtggttaaacaa
gaacaggaaattgccgagcaaagcattttggtgcatcagattcgtaatatcgatgttgag
gatagcaagagtgcttatgcaaccgagcaagatgcgatcaaagcgtttttggcgtttatt
cgcggtgcgacactggtggggtattatttggaattcgatgtcgctatggtcaatcgcgtg
attaagccttggctcggtattgagctgcccaaccctaaaatagaagtgtccgagctgtat
tatttatatgccagacgggaggctaagcgcagctgtatagaaccgaatatcgatttgcgt
tttgatagcattctaaagcatttgcagctgccgaatttcggccagcatgacgccgctaat
gatgcgttaatgacggcgttgatttttgttaaactgcaaaagatggggttaagataa

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