Thiomicrorhabdus sediminis: FE785_06525
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Entry
FE785_06525 CDS
T05983
Name
(GenBank) rRNA large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
thig
Thiomicrorhabdus sediminis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thig03009
]
FE785_06525
Enzymes [BR:
thig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
FE785_06525
Ribosome biogenesis [BR:
thig03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FE785_06525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
QCU90307
UniProt:
A0A4P9K7T8
LinkDB
All DBs
Position
1433912..1434475
Genome browser
AA seq
187 aa
AA seq
DB search
MSKVLLFNKPFNVLCQFTDEAQFKNERETLADYIDQPGFYAAGRLDRDSEGLLLLTDDGK
LQQQIANPNNKQAKTYLVQVEGAIDKKAIQQLSKGVELKDGLTRPAKARIVNEPRWLWER
NPPIRQRKNIPTSWIELTISEGKNRQVRRMTAAVGFPTLRLIRTQIGPWKLADLGLGESL
LLDNLTL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagttttgctcttcaataaacctttcaatgtactctgtcagtttaccgatgag
gcgcagtttaaaaatgagcgagagactctcgccgattatatcgatcagccgggtttttat
gccgccggacgtttagatcgggattctgaagggctattgctattgaccgatgacggcaag
ctgcagcaacagatcgccaacccgaataacaaacaggcgaaaacctatctggttcaggtt
gagggcgcgattgataaaaaagcgattcaacagctgagtaaaggcgttgaactcaaagac
ggtcttactcgaccggccaaagcgcgtatcgtcaacgaaccgcgctggttatgggagcgc
aatccgccgattcggcaacgtaaaaacattcccaccagttggattgagctgactatcagc
gaaggtaaaaaccgtcaggttcgccgcatgacagcagcggtcggctttcccacactaagg
ttgatccgtacccaaatcggcccttggaaactcgccgacctaggcttgggtgaaagcctt
ctgctggataatctgacgttgtaa
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