Thiomicrorhabdus sediminis: FE785_06745
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Entry
FE785_06745 CDS
T05983
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00541
Biosynthesis of various nucleotide sugars
thig01100
Metabolic pathways
thig01250
Biosynthesis of nucleotide sugars
Module
thig_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FE785_06745 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
thig01005
]
FE785_06745 (kdsB)
Enzymes [BR:
thig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
FE785_06745 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
thig01005
]
Lipid A
FE785_06745 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QCU90348
UniProt:
A0A4P9K659
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Position
complement(1482850..1483635)
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AA seq
261 aa
AA seq
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MSFTVIIPARFQSSRLPGKPLMDIHGYPMIQWTWLQAKKSGAERIIITTESKQVEQACLA
FGAEVCLTSDHHQSGTERIAEVIDLLQLDDNEVIVNVQGDEPMLPPELIHQVAQGLANQL
NDRGVVAHMATLCEPIEDIDTVFDAHAVKVTRDAHNYAINFSRAALPWARDEFALTDRQM
PSNWHYKRHIGLYAYTAGFVKQYVAWPACDLEQVEKLEQLRVLWHGEKILVLDALMDAGI
GVDTESDLIKVRQKLSAENFK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgtccttcaccgttattattcctgcgcgtttccaatcgagccgtttaccgggcaagccg
ctgatggatatccatggttatccaatgattcaatggacttggctgcaagccaaaaagtcc
ggtgctgagcgcattatcattaccacggaatctaagcaggttgagcaagcttgtttggcg
tttggtgctgaggtctgtctaacttctgatcatcatcaatccggtacggagcgtatcgcg
gaagtcattgatctcttgcagcttgatgacaatgaagtgatcgtcaatgtccagggcgat
gaaccgatgttgcctccggaattgattcatcaggttgcacaaggtttggccaatcagctc
aatgatcgaggtgtggtggcgcacatggcaacactttgcgagccgattgaggatatcgat
acggtgtttgatgcgcatgcggtaaaagtcacgcgtgatgcgcacaactatgcgattaat
ttcagccgagcggcgttgccgtgggcgcgcgacgagtttgccttaacagacaggcagatg
ccgagcaattggcattataagcgccatatcgggctttatgcctacacagcagggtttgtt
aagcagtatgttgcttggccggcttgcgatctggagcaggtggagaaactcgagcagcta
agagttttatggcatggcgagaaaattcttgttttggatgcgttaatggatgccggaatc
ggtgtcgataccgaatcggacttgattaaggtgcgccagaaattgagcgctgaaaatttt
aaatga
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