Thiomicrorhabdus sediminis: FE785_07085
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Entry
FE785_07085 CDS
T05983
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00260
Glycine, serine and threonine metabolism
thig00460
Cyanoamino acid metabolism
thig00630
Glyoxylate and dicarboxylate metabolism
thig00670
One carbon pool by folate
thig00680
Methane metabolism
thig01100
Metabolic pathways
thig01110
Biosynthesis of secondary metabolites
thig01120
Microbial metabolism in diverse environments
thig01200
Carbon metabolism
thig01230
Biosynthesis of amino acids
thig01240
Biosynthesis of cofactors
thig04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FE785_07085
09102 Energy metabolism
00680 Methane metabolism
FE785_07085
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FE785_07085
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FE785_07085
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FE785_07085
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FE785_07085
Enzymes [BR:
thig01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FE785_07085
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
QCU90409
UniProt:
A0A4P9K5Z9
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Position
complement(1553834..1555105)
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AA seq
423 aa
AA seq
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MFTKDMTIAGYDDLIADAIKNEENRQESHIELIASENYTSPRVMEAQGSYFTNKYAEGYP
GKRYYGGCEFADIVEQAAIDRAKELFGADYANVQPHSGSQANAAVYMALCEPGDTVLGMS
LAHGGHLTHGSHVSFSGKIYNAVQYGIDPVTGQIDYDEVQKLADEHKPKMIIAGFSAYSQ
VIDWSKFRAIADSVGAYLFVDMAHVAGLVAGGLYPNPVPFADVVTTTTHKTLRGPRGGLI
ICKANAEIEKKLNSAIFPGGQGGPLVHVMAAKAVAFKECLEPSWKTYAENVVKNAQAMAK
VFMSRGCDVVSGGTENHLFLVSLIEKGLTGKLVDAALDAAHITVNKNSVPNDPMSPFVTS
GIRVGTPAATSRGFDETDCTNLATWMCDVIDACDQSSESWDEAVIADVREKVSALCAAKP
VYK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttcactaaagatatgactattgctggctatgacgatttgatcgcggatgcgattaaa
aatgaagaaaatcgtcaagagtctcatattgaattgattgcttctgaaaactataccagc
ccacgtgttatggaagcacaagggtcatacttcaccaataagtatgcggaaggttaccca
ggtaaacgttattacggtggttgtgagttcgcggatatcgtcgagcaagcggcaatcgat
cgtgctaaagagttgttcggcgcggattacgctaacgttcagccacactctggttctcag
gcaaacgcagcagtttatatggcattgtgcgagccgggcgatacggttctaggtatgagc
ttggcgcacggtggtcacttgactcacggttctcacgttagcttctcaggtaaaatctac
aatgcggttcagtacggtatcgacccagttaccggtcaaatcgattatgacgaagttcaa
aagctagcggatgagcataagccgaaaatgattattgccggtttctcggcctactcgcag
gtgatcgattggtcaaaattccgcgctattgcggattctgtaggcgcttacctatttgtg
gatatggctcacgttgccggtcttgtagcaggtggtctttatcctaaccctgtaccattt
gcggatgtggtgacaaccaccactcacaaaacgctacgtggtcctcgtggcggtttgatt
atctgtaaagcaaatgctgaaatcgaaaagaaattgaactcggcgattttccctggtggt
cagggtggtcctttggttcacgtgatggcggcaaaagcggttgcgttcaaagagtgtcta
gaaccttcatggaaaacttacgcggaaaacgtagtgaaaaacgctcaagcgatggctaag
gtgtttatgtcacgcggctgtgatgtggtttctggcggcacagaaaaccacctgttccta
gtgagcctgattgaaaaaggcctaaccggtaagttggttgatgccgctttagatgcagcg
catatcactgttaacaaaaactcggtaccgaatgatccaatgtctccatttgtgacttca
ggtattcgtgttggaactccggctgcaacaagccgcggttttgatgaaaccgattgtaca
aacttggcgacttggatgtgtgatgtcatcgatgcttgtgaccagtccagcgagtcttgg
gatgaagcggtgattgccgatgtgcgcgaaaaagtatctgctttgtgtgccgctaagccg
gtatataaataa
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