Thiomicrorhabdus sediminis: FE785_07335
Help
Entry
FE785_07335 CDS
T05983
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig02020
Two-component system
thig02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FE785_07335
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FE785_07335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
thig02022
]
FE785_07335
02035 Bacterial motility proteins [BR:
thig02035
]
FE785_07335
Two-component system [BR:
thig02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
FE785_07335
Bacterial motility proteins [BR:
thig02035
]
Flagellar system
Flagellar assembly proteins
Others
FE785_07335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
HTH_11
AAA_2
OKR_DC_1_N
nSTAND3
Mg_chelatase
HTH_24
AAA_16
MCM
FleQ
HTH_20
AAA_7
HTH_28
Beta_elim_lyase
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
QCU90456
UniProt:
A0A4P9K7V7
LinkDB
All DBs
Position
complement(1608496..1609872)
Genome browser
AA seq
458 aa
AA seq
DB search
MSIAKILVVEDDAVLQEALVDTLSIHGFEVISVSNAEDALKALKDDIGMVFSDIRMDGMD
GYTLMTKIRAAKPYLPIVLMTAYGTIEQAVDAMKAGAVDYIVKPFEANVLVEKAKAYFNR
DASQEDDFIAADPATQQLKTMAKKVAESDASVMIGGESGTGKEVLARYIHLQSARAKQPF
VAINCAAIPETMLEATLFGYEKGAFTGAMKSMPGKFEQAQGGTIFLDEIGEMQIDLQAKI
LRVLQEKEVERLGSTKAVNLDVRVLSASNIDMKQAISENKFREDLFYRLNVFPMRLSPLR
ERPRDIAAIAERLIERHCGSNRVQPMISAQAMKRLIEYRWPGNIRELDNVIQRALLLMSG
DTIQEQNILLDDGFVEPLTQKQSSVMSGQGDEAGEAKEFSISDEELPLDLKARETHLILE
TLRQNDGHRQKTAEALNISPRTLRYKIAKLKEQGVEVP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgcaaaaattttagttgtcgaagatgacgctgtattgcaggaagcgttggtc
gatactttgagcattcatggtttcgaggtcattagtgtcagcaatgcagaagatgccctt
aaggcgttaaaagatgatatcggcatggtgtttagcgatattcgcatggacggcatggac
ggctatactctaatgacaaaaattcgtgccgctaagccttatttgccgattgtcttgatg
actgcctacggtactatcgagcaggccgtcgatgcgatgaaagccggcgcggtggattat
atcgtcaaaccctttgaagccaatgtcttggtagaaaaggccaaggcgtattttaatcgc
gacgcatctcaagaagatgattttattgccgctgatccggcgacccagcagttgaaaacc
atggcgaaaaaggtcgctgaaagtgacgccagtgtgatgattggtggggaaagtggaacc
ggtaaagaagtgctggcacgttatattcatttgcagtcggcaagagctaagcagccgttt
gttgcgattaactgtgcagccatacctgagaccatgcttgaagctactttgttcggttat
gaaaaaggtgcctttaccggtgcgatgaaatccatgcccggtaagtttgaacaggcacag
gggggtacgattttcttggacgagatcggcgaaatgcagatcgacctgcaggcaaaaatt
ttgcgtgttttacaggaaaaggaagtggagcgacttggtagcaccaaagcggttaatttg
gatgtgcgagtgttaagtgcttcaaatatcgatatgaaacaggcgattagcgagaataaa
ttccgtgaggatctgttttatcgtctgaatgtttttccgatgcgcctatcgccgttacgt
gaaagaccaagagatattgccgcgattgcggaacgattgattgagcgccattgcggcagt
aatcgtgtgcaaccgatgatatcggctcaggcaatgaagcgtttaattgaataccgttgg
ccgggcaatatccgcgaattggataatgtgatccaacgagctttattgctgatgagcggt
gataccatccaggaacagaatattttattagatgacggttttgtcgagcctctaacgcag
aagcaaagcagcgtgatgagcgggcagggcgatgaagctggcgaggctaaagagttttcg
ataagtgatgaagagttgccactggatttaaaagccagagaaacgcacttgatattagaa
accttgcgtcagaatgacggtcatcgtcaaaaaacggctgaagcattaaatatcagtccg
agaactttgcgctataagattgctaaactgaaagagcagggggtagaagttccttaa
DBGET
integrated database retrieval system
