Thiomicrorhabdus sediminis: FE785_07345
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Entry
FE785_07345 CDS
T05983
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig02020
Two-component system
thig02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FE785_07345
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FE785_07345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thig03000
]
FE785_07345
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thig02035
]
FE785_07345
Transcription factors [BR:
thig03000
]
Prokaryotic type
Helix-turn-helix
Other families
FE785_07345
Bacterial motility proteins [BR:
thig02035
]
Flagellar system
Flagellar assembly proteins
Others
FE785_07345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
Mg_chelatase
bpMoxR
AAA_7
AAA_2
HTH_50
nSTAND3
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QCU90457
UniProt:
A0A4P9K870
LinkDB
All DBs
Position
complement(1611098..1612204)
Genome browser
AA seq
368 aa
AA seq
DB search
MSEDIFASLVGSGSAMQQVKKLILQVAQTDATVLILGESGTGKEVVAQALHNASSRSNKA
FIPINCGAIPGELLESELFGHEKGAFTGAITARKGRFEMAEKGSIFLDEIGDMPLPMQVK
LLRVLQERIYERVGGNKSFECDVRVIAATHRNLEDNIADGNFREDLFYRLNVFPIEMPAL
RERPEDIPELIEFMFSRIAASGRKIPDLSEKALLALQNYQWPGNVRELGNLSERLSILFP
GLKVDYDDLPVKYQVELDENASLLVAEKVSAEIAVPSAQSANDQSPVNNDETASQTVQAE
PAAIDSSLSMGAPNLEDGLDLKSYLVEMEIQLIQKALNQTEGNVSQAAKLLQTNRTTLVE
KIRKYELS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatatctttgcttcgctcgtcggcagtggctcggcgatgcaacaagtcaaa
aaacttattctacaagtagcgcaaaccgatgcgacggttttgattctaggtgaatccgga
accggtaaagaagtcgtcgcccaagcgcttcacaatgcttcttcccgttctaataaagcg
tttattccaatcaactgcggtgcgatccctggtgaattgctggaaagcgagctttttggt
catgaaaaaggagcctttaccggcgctatcactgctcgtaaaggtcgctttgaaatggct
gaaaaaggttcgatttttctcgatgaaatcggtgatatgcctttgccgatgcaggtgaaa
ttattacgggtgctccaagaacgtatttacgaacgtgtcggtggcaataaaagctttgag
tgtgatgtgcgcgtgattgcggcaacccatcgcaatctggaagacaatattgctgacggt
aatttccgcgaggatctgttttaccgtttgaatgtttttcctatcgaaatgccggcgcta
cgcgagcgtccggaagatattccggagttgattgaattcatgttctcacgtatcgctgcc
agtggccgtaagattcctgacttgtccgaaaaagcgttgctggctttacaaaattatcaa
tggcccggcaatgttcgcgagttgggtaatttaagtgaacgcctatccattctgtttccc
gggttgaaggttgattatgatgacctgccggtaaagtatcaggttgagctggatgaaaat
gccagtttgctggtggcagaaaaagtctcagcagaaattgccgtcccatcggcgcaaagc
gctaatgaccaatcgccagtaaacaacgatgaaacagcctcgcaaacggttcaagccgag
cctgcggcaatcgatagcagtctttcaatgggcgccccgaatctggaagacggtttggat
ttaaagtcttatctggtagaaatggaaatccaactgattcagaaagcgcttaatcaaacc
gaaggcaatgtttcccaagcggcgaaactgttgcagaccaatcgcaccaccttggtggaa
aaaatacgcaagtatgagttgagttag
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