Thiomicrorhabdus sediminis: FE785_07470
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Entry
FE785_07470 CDS
T05983
Name
(GenBank) DUF3393 domain-containing protein
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
thig
Thiomicrorhabdus sediminis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thig01011
]
FE785_07470
Enzymes [BR:
thig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FE785_07470
Peptidoglycan biosynthesis and degradation proteins [BR:
thig01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FE785_07470
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SLT
Mltc_N
DUF4831
SLT_4
Sec7
SGBP_B_XBD
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
QCU90482
UniProt:
A0A4P9K635
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Position
complement(1637687..1638913)
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AA seq
408 aa
AA seq
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MNQSLKNTMILLFMAGILIFISGYLTSFQQWLSLNYHQDRMSSSSYQGFSQSSGGIRQII
GTEKIAQQIDPPALTNSSEFAQPKAQQNHQSPYLPENTLGHASQTLTTTTEVVTANRKPL
PVLIELDNELIVEFSSHYSSYEVQRALSRLMVLHNPQQIESLLNKQSIDTRERPHYYPRI
ENQFQQSVRYPAQAYRYAEYLLANFSQTVVENNEQWQIVTIPLKTFELPDKAKSYQNLVE
QFSREYAVDNDLVYAIMEVESAFNPRAVSRSKALGLMQIKPGSAGRDVFKYVDNQAGQPS
EQALFNPKDNIRIGVAYLSLLKQMYFKDVKDKTKKELLAVASYNGGLNTVFKLFGKTPEQ
SVARINRLSAERIYWILRQKHESNETRQYIEKVMAKRKKYQKLLQAAA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccaatctttaaaaaacacaatgattctactgtttatggcggggatattgatattt
atctcaggctacctgacgtcatttcaacagtggttaagccttaattatcatcaagataga
atgagttcatcgtcttatcaaggtttttcccaaagctctggcggtattcgtcaaattatt
ggcacagaaaaaatagcgcaacaaattgatccgcctgcgctaactaactcgagcgagttt
gctcagcctaaagcgcagcaaaatcaccaaagcccatatttgccagaaaatactctaggg
catgcctctcaaacattgacgactactactgaggttgtaaccgccaatagaaagccttta
ccggttttaatagagcttgataatgagctgattgtcgaattttcctcgcactattcctct
tatgaagtccagcgtgccttatcgcgcttgatggttttgcataatcctcaacaaatagaa
tctttgctgaataaacagtcgatagacactcgtgaaagacctcattattacccgcgcata
gaaaatcagttccaacagtcggtgcgctatccggcacaagcctatagatatgccgaatac
ctgcttgccaactttagtcaaacggtggttgaaaataatgagcaatggcagattgttacc
attccgttaaagacatttgagttacccgataaggcgaaatcctatcagaatttggttgag
cagtttagtcgtgaatatgctgttgataatgatttggtatatgccattatggaagtcgag
agcgcgtttaatcccagagcggtaagccgttcaaaagcgctgggtttaatgcagattaaa
cctggcagcgccggacgagatgtctttaaatacgtcgataatcaagcgggacagccatcg
gagcaggcactgttcaaccctaaagataatattcgtatcggtgtcgcttatttaagcctg
ttaaagcaaatgtattttaaagacgtgaaagacaaaactaaaaaagagttgcttgctgtg
gcttcttataacggtggcctgaataccgtcttcaaattattcggtaaaacgccagaacag
tctgttgcgcgaattaaccgattatcggcggaacgtatttattggattttgagacaaaag
catgaatccaatgaaacccgtcaatatattgaaaaagtgatggcaaagcgtaaaaaatac
caaaaactactgcaagcagccgcttaa
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