Thiomicrorhabdus sediminis: FE785_08330
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Entry
FE785_08330 CDS
T05983
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00470
D-Amino acid metabolism
thig00550
Peptidoglycan biosynthesis
thig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FE785_08330 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FE785_08330 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thig01011
]
FE785_08330 (murD)
Enzymes [BR:
thig01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FE785_08330 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
thig01011
]
Precursor biosynthesis
Amino acid ligase
FE785_08330 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
ParA
CbiA
Motif
Other DBs
NCBI-ProteinID:
QCU90639
UniProt:
A0A4P9K6K2
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Position
complement(1821726..1823081)
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AA seq
451 aa
AA seq
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MYLVAGLGVTGQSVLRYFHSQGENCLAFDTRADFDISSLQQEFSEVEFALQELPSGWLPR
FDTVVLSPGISKAEPWVEALRRSGKQVIGDIELFARAVGAPVIAITGSNGKSTVTTLTGM
ALQQAGYQVGVGGNIGEPALDLLIDDNEYDVYVLELSSFQLETTYSLQTESSTVLNISED
HMDRYNGIEDYIQAKTKVFADTEFAVIPFGFSEFAMVHHGQLLHFGLKQVNELTDMDYGI
VELDGKLYLGHGQTAQVAIEDMLLQGGHHQLNALAMLALCRPFQVENTHFIEVLKRFNGL
PHRTQLIANHNQISWVNDSKGTNVGATITAIESLGAACSGELVLIAGGVGKDADFSGLKI
PVEQFCKTVVLFGRDREDIYHAIQATDLQNEREVDVLLVEDLNEAVNRAKQIATSGDCVL
FSPACASFDQFSNYVQRGEVFESLVKQCCVE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtatttagttgctggtttaggcgttacaggacagtctgtattgcgctacttccacagc
caaggcgaaaactgcctagcatttgatacccgtgctgattttgatatcagttcattacaa
caagaatttagcgaagtggaattcgctttgcaagagttgcccagtggttggttgcctcgc
tttgatacggtggtgcttagtcccggtatctctaaagccgaaccttgggttgaggcactc
cgtcgttccggtaaacaggtcatcggcgatattgaactctttgcccgcgcggtcggcgct
ccggttatcgccattaccggttccaacggtaaaagtacggtcaccactttgaccggtatg
gctttgcagcaggccggttatcaggtcggtgtcggcggcaatattggtgagccggcgctt
gacctcttgattgatgataacgaatacgatgtttatgtgctggagctatccagttttcaa
ctcgaaacgacctattcgttacagaccgaatcttccactgtgttgaatatcagcgaagac
catatggatcgctataacggtattgaggattatattcaggccaaaaccaaggtgtttgcc
gataccgagtttgccgtgattccatttggttttagtgaattcgcaatggttcatcacggc
cagttactgcattttggcttaaagcaggtgaacgagctaaccgatatggattacggtatc
gtcgaactggatggcaagctttatctggggcatggccagaccgcgcaagtcgccatagag
gatatgctgttgcagggcggtcaccatcagttgaatgctttggcaatgctggctctttgt
cgaccgttccaagtggaaaatactcattttattgaggtcttgaaacgttttaacggcttg
ccgcaccgcacgcaattgatcgctaaccataaccagatatcgtgggtcaacgattccaaa
gggaccaatgtcggcgcgaccatcaccgcgattgaaagcttgggggctgcgtgctcagga
gagttggtgctgattgccggaggagtgggcaaggatgccgatttttccggtttgaaaatt
cccgttgagcagttctgtaaaacggtggtgttgtttggtagagatcgcgaagatatctat
catgcgattcaagcaaccgacctgcaaaatgaacgcgaagtcgatgttttattggtcgaa
gatttaaatgaagcggttaatcgagccaagcaaattgctaccagtggcgattgcgtcctg
ttttctccggcatgtgccagctttgatcaatttagcaactatgtccagcgcggtgaagtt
tttgaaagccttgttaagcagtgttgtgttgagtga
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