Thiomicrorhabdus sediminis: FE785_08675
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Entry
FE785_08675 CDS
T05983
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
thig
Thiomicrorhabdus sediminis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thig03019
]
FE785_08675
03009 Ribosome biogenesis [BR:
thig03009
]
FE785_08675
Messenger RNA biogenesis [BR:
thig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FE785_08675
Ribosome biogenesis [BR:
thig03009
]
Prokaryotic type
rRNA processing factors
FE785_08675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QCU90696
UniProt:
A0A4P9K8G6
LinkDB
All DBs
Position
complement(1902596..1904065)
Genome browser
AA seq
489 aa
AA seq
DB search
MHNEEKILVNVTPNETRVAWVENGVLQEVWVERANKRGLVGNIYMGKVERVLPGMQAAFI
NIGLERAAFLHVSDVCHKAIGSEDEDCEDITKLLRQGQKIMVQVLKDPLGTKGARITMQV
TIPSRMLVYMPVENTLGVSQKIDDSEERERLREMVKTIPEFTDSEGGVIVRTVAEGVDFH
EMRADMIYLQRLWNGVQERAKAARKPALIYEDLPLYLRILRDIPIDRIENIRVDSTETLN
KMRDFVEMYVIELKDRVGLYQGERPIFDLYNIEEEIQTALHKRVNLKSGGYLIIDQTEAM
TTIDVNTGAFVGHRNLEETIYRTNLEATQAIARQLRLRNLGGIIILDFIDMDDAEHQSHV
LNALTKELSKDRVKTSISNISSLGLVEMTRKRTRESLERTLCEPCPICNGSGTVKTPETI
AYEIFREITRMARSFNASKYRVIAAEAVVSRIMDEESSSVAELEAFLKKSIRFQAESSYA
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcataacgaagaaaagatattagtcaatgtcacgccaaatgaaacacgtgttgcttgg
gtggaaaacggtgttttacaagaagtatgggtcgaacgtgctaacaaacgcggtttagtc
ggcaatatctacatgggtaaggtcgagcgtgtattaccggggatgcaggcggcttttatt
aatatcggcctcgaaagagcggcgtttttgcatgtttccgatgtgtgtcataaagctatt
ggcagcgaagatgaagattgtgaagacatcaccaaattgctgcgccaagggcaaaagatt
atggtgcaggtgctcaaggatcctttaggtactaaaggcgctcgcattaccatgcaggtg
accatcccgtcacgtatgttggtgtatatgccggtggagaatactttgggtgtttcgcaa
aaaattgatgactcggaagagcgcgagcgtttgcgagagatggtcaaaaccattcctgaa
tttaccgattcagagggtggggtgattgtccgtacggttgccgagggcgttgattttcac
gaaatgcgcgccgatatgatttatttgcaacgtctctggaatggtgtgcaagagcgtgcc
aaagcggcccgcaaaccggctttgatttatgaggatttgccgctctacttacgaatttta
cgagatatcccgatcgatagaattgaaaacattcgtgtcgattcgaccgaaaccttaaat
aaaatgcgtgattttgtcgaaatgtatgttatcgaactgaaagatcgtgttggcttgtat
caaggtgagcgcccgattttcgatctctacaatatcgaagaagagattcaaaccgctttg
cataaacgtgtcaatttgaagtctggcggctatttgataatcgatcagacagaagccatg
actacgattgatgtcaataccggtgcttttgtcggtcatcgtaacctggaagagaccatt
tatcgaaccaatctcgaggccactcaagccattgctcgccagcttcgtttgcgtaacctg
ggcggaattatcattctcgattttatcgatatggatgatgctgagcatcaaagccatgta
ttgaatgcgctaaccaaagagttgagtaaagatcgagtaaagacttccattagcaatatt
tccagcttggggttggtggagatgactcgtaagcgaactcgagagagtctggaaagaacc
ttgtgcgaaccttgccctatctgtaacggcagcggtacggttaaaaccccggaaaccatc
gcttatgagatttttcgcgagattacccgtatggcgcgctcttttaatgccagtaaatac
cgtgttatcgctgctgaagcggtggtctcgcgtattatggatgaagaatccagtagtgtg
gctgaattagaagcctttttgaaaaagagcatacgttttcaggctgagagcagttacgca
caagagcagtttgatgtagtcatgatgtaa
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