Thiomicrorhabdus sediminis: FE785_08705
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Entry
FE785_08705 CDS
T05983
Name
(GenBank) hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00540
Lipopolysaccharide biosynthesis
thig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FE785_08705
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
thig01005
]
FE785_08705
Enzymes [BR:
thig01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
FE785_08705
Lipopolysaccharide biosynthesis proteins [BR:
thig01005
]
Core region
FE785_08705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
QCU90702
UniProt:
A0A4P9K6L1
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All DBs
Position
complement(1909925..1911172)
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AA seq
415 aa
AA seq
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MFEAIKTMKPVERLFSVMSLCAVVPLYFEDTRQVLGLIFIAIMSYLFFRKDKPKTYSFHR
YEKWWLWSAVIYAVVFILSFLLRPPYTDDGSWRIAAPIFILLLSVWYFLAIRYDVQAKLI
KFVAIASVVTATALFVIEVLVIHWPLGYRLGLVYSDLGATGFIVPITAIMLAVLWLSDRS
NKYLWLFIVGFILASLSGGRTSMSLVVIPIVFVLYYVLFFSSLFTKQQKTILLMLSIIFI
SLAAWFAKDKLVETVSDYQIAQQGEFYSSLGLRYAMNDIGLSVFQNNSLVGVGPSEYKES
LKAESENSNYSTQVKDSIQGFMQIHNQYLMDMILSGWFGLLSVLGFIFLPAVIFLCLLKR
NQQSLALRAALGLSVAIGFIQLFGANFTYTYTTIFYVMAMGSLISFLSKKQESLQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaagctattaagaccatgaaaccagtagaaaggctattttcagtcatgtcttta
tgcgccgttgttccgttgtattttgaggatacaaggcaggtactggggctgatttttatt
gctatcatgtcgtatctgttttttaggaaggataagcccaagacttatagttttcaccgc
tatgaaaaatggtggctttggagtgcggtgatttatgcggtcgtttttattttgagtttt
ctattgcgtccaccttatacagatgatggttcatggcgcattgcggcaccgatatttatt
ctcttattgtctgtttggtattttttggcaattcgatatgatgttcaggcgaagttaata
aagtttgttgctatagcttcagtagttactgcgacggccttatttgtgatagaagttctt
gtgattcattggccgctaggctatagattagggttggtatattcagacttgggagcgaca
ggctttattgtgcctattactgctatcatgctggcggtgctttggctatctgatcgcagc
aataaatacttgtggttatttattgtaggttttattttagcttcgctaagcggtgggcgg
acttcaatgagtttggttgtaattcctattgtatttgttctttattatgtattgtttttc
agttcgctgtttacgaagcaacagaagacgattttattgatgttatcaattatttttatt
tcattagcggcttggtttgctaaagataagcttgttgaaactgtttccgactatcaaata
gcgcaacaaggtgagttttatagctcattgggattacgctatgctatgaatgatattggg
ttaagtgtgtttcagaataactctcttgtgggcgtcgggccgagtgaatataaggagagt
cttaaggccgagtcagagaactcaaactattccactcaagttaaagattctatacaaggg
tttatgcaaattcataatcaatatctgatggatatgatattgagtggttggtttggttta
ttgtcggtgttaggttttatctttttgcccgcggttatttttttatgtttacttaaacgt
aatcaacagagtttggccttgagggcagctcttggtctaagcgttgcgataggctttatt
caattatttggcgctaatttcacttatacatacacgacaatattttatgtaatggctatg
gggtcattgattagttttttgagtaaaaagcaagagagtttgcagtga
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