Thiomicrorhabdus sediminis: FE785_08770
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Entry
FE785_08770 CDS
T05983
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig03030
DNA replication
thig03430
Mismatch repair
thig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE785_08770
03430 Mismatch repair
FE785_08770
03440 Homologous recombination
FE785_08770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thig03032
]
FE785_08770
03400 DNA repair and recombination proteins [BR:
thig03400
]
FE785_08770
Enzymes [BR:
thig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE785_08770
DNA replication proteins [BR:
thig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FE785_08770
DNA repair and recombination proteins [BR:
thig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FE785_08770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
AAA_19
AAA_18
TsaE
Rad17
nSTAND3
TniB
AAA_7
AAA_24
AAA_2
PIF1
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QCU90715
UniProt:
A0A4P9K6N1
LinkDB
All DBs
Position
complement(1922687..1925281)
Genome browser
AA seq
864 aa
AA seq
DB search
MSYTVLARKWRPKNFAELVGQTHVMQALANALDQQRLHHAYLFTGTRGVGKTTIARIFAK
ALNCQHGISSNPCGQCETCRSIDEGRFIDLIEVDAASKTKVDDTREILDNVQFAPTQGRY
KVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPHKLPITVLSRCLQFNLMRLTQ
TQIQTHLANILQQENIVYEDAALALLAKSGDGSARDSLSLLDQAIAYGAGQVMFDAVQTM
LGLVDQQFSVGILQALANDDNEAIKQLIQQLATMGVDYQALLSQLIESLHAITYCQVFAE
AETTTVLPKDIIIGLAEQFSAEKVQILYQIALLAKQDMALAPDIRIGFEMSLMRMLAFQP
VQASQAVGSTMQASGAQAANSGATSLSSGASGLSSATADDGEQMLGNMSAEEAMANLASA
RSLVGKSAQKKTLTDSQNTTLEAAIKPEAVQNSNLSQVAEQKVQSAEIVAMQDNALAPQQ
TFCQQQDAVTGAVESRQNHSTDNSGSFAEALEATAVEMSVEQNTAVQASAEQPVVEEQAA
ASMHSDHLSMIRQRLKQSSLSQQADSGIAAEVTASQPVNPAEQLNQAKAPFNDSPVVEEV
YSEPMAVNQQLVAEQKSPYLQSNPQIDAQVDEYVDDHNSEPASFMDGYAQLPFSDNAAGP
AQPNQTGQAESMSANPAADIPPWLESGHGVAEPIQESPVSPVTQSESISPNMVAEAAQNS
QIKPIEESASKPAAPIMTGDKLQDWLQLIEHLQINGMAAEIARNSVLVAIDQQSMQISID
PQQQYAMADAPLQQIEQAAQQAFGKGFKLQLVDANEHFTPAKYAQQQAQNLQSQAEQSIS
SDPIVQQLKQALNLEVINGSIKPV
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagttataccgttcttgcccgcaagtggcgacctaaaaattttgcagaattagtgggc
caaacccatgttatgcaggccttggcaaacgcactggatcagcagcgtttacaccatgct
tacctgtttaccggtacccgtggggtgggcaaaaccaccatcgcgagaattttcgccaag
gcgttgaattgtcagcacggtatttcttcaaacccatgcggtcagtgcgaaacttgtcgt
tcgattgacgaaggccgttttattgacttgattgaagttgatgcggcatctaaaaccaaa
gtcgatgatacccgtgagattcttgataatgtccagttcgcaccgactcaggggcgctac
aaagtctacctgatcgatgaagtgcacatgctctctaaaagtagttttaatgctttattg
aaaaccttggaagagccacctgagcacgttaagtttctgttagcgaccaccgatccgcat
aagttgcctatcactgtattatcgcgctgcttgcagtttaacctgatgcgtttgacgcaa
actcagatccagacgcatttagcgaatattctgcaacaagaaaacattgtttatgaagac
gctgccttggcattgctcgccaaaagtggtgatggttcggcacgagacagtttgagtttg
ttggatcaggccatcgcctatggcgcaggtcaggtcatgtttgatgccgtgcaaaccatg
ttaggcttggttgatcagcaattcagcgttggtattttgcaagccttggctaatgatgat
aatgaagccattaagcaacttattcagcagttggcgacgatgggggtggattatcaagcc
ttgctttcacaattaattgaaagtttgcatgccattacctactgccaagtatttgctgaa
gccgagaccacaacggtcttgccaaaagatattattatcggtctggccgagcagttcagc
gcggaaaaggtacagatactttaccaaatcgccttattggcaaaacaggatatggcactg
gcgccggatattcgcatcggttttgagatgtccttgatgcgtatgcttgccttccagccg
gtgcaagcctctcaggcggtaggctccacaatgcaagccagcggagcacaagcagctaat
agtggtgcaacttcattgtcctccggcgcttcaggtttatcctcagcaactgcagatgat
ggcgaacagatgttgggtaatatgtctgcagaagaggcgatggctaacttggcctcggcg
cgctctttggtaggcaaaagcgctcaaaaaaaaactctaacggatagtcaaaacacgact
ctagaggctgccattaagccggaggctgtgcagaattcaaacctttcacaagtggcagag
caaaaggttcaatcagccgaaatcgtagccatgcaagacaatgctctggctcctcagcaa
accttttgtcaacagcaagatgccgttactggagcggtagagtcgcgacaaaatcactct
actgataactcaggctcttttgcagaagcgcttgaagcaactgctgtcgagatgtcggtt
gagcaaaatactgctgttcaggcatctgccgaacaacctgttgttgaagagcaagcagca
gcttccatgcatagtgatcatttgtcgatgattcgccagcgcctcaagcagagctcttta
tcacagcaggcagacagcggtattgctgctgaggtgacggcatcgcaaccagtaaatcca
gccgaacaattaaatcaggctaaggctccgtttaatgattctcctgttgtggaggaagtt
tattccgagccaatggctgtcaatcagcagctcgttgccgagcaaaagtcaccatatctg
cagtctaatcctcaaattgacgcgcaggttgatgagtatgttgatgatcataattccgag
ccggcatcctttatggacggttatgcgcagttgccttttagtgacaatgcagcggggccg
gcgcaaccaaaccaaaccgggcaggcagaaagtatgagcgcaaacccggcggcggatatt
ccaccatggttggagtctgggcatggtgttgcagaaccgatccaggagagcccggtttcc
ccagtgacacagtctgaatctatctcaccaaatatggttgcagaggcggctcaaaatagc
caaattaagccgatagaggagtctgcttccaagccggcggcgccaatcatgacgggtgat
aaattgcaggattggttgcagttgattgaacatctgcaaattaatggtatggcagcagaa
atcgcacgaaacagtgttttggttgcgattgatcagcaatccatgcaaatcagtattgat
ccgcaacaacaatacgcaatggctgacgcgccgctgcagcaaattgagcaggcggcacaa
caggcattcggtaaagggttcaaattacagttggtggacgccaatgaacactttaccccg
gctaaatacgcgcagcagcaggcgcaaaacctgcaatctcaagcagagcagtccatttca
agtgatccgattgttcagcagcttaaacaagcgctgaatttagaggtgatcaacggttcg
attaagcctgtttaa
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