Thiomicrorhabdus sediminis: FE785_08880
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Entry
FE785_08880 CDS
T05983
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FE785_08880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thig02000
]
FE785_08880
02044 Secretion system [BR:
thig02044
]
FE785_08880
Transporters [BR:
thig02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FE785_08880
Secretion system [BR:
thig02044
]
Type I secretion system
Adhesin protein transporter
FE785_08880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QCU90733
UniProt:
A0A4V1HHZ4
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All DBs
Position
1951364..1953499
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AA seq
711 aa
AA seq
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MTEKIINDPLTECLLILCRFHDRNTTRDNLVSGLPLNNGQLSPSHFERAAKRADLASKFA
KRKLTQINSSLMPAILILKDDDNAQSACVLLAVTDGNAQLIYPDLPDTVVEKPLYQLESD
YSGQVIYVRPEFHFDSRATQFTQNTMHWFWGVIKENHGLYRDILIASIFINLFAIAMPLF
VMNVYDRVVPNHTTETLWMLAIGIGLVMCAELALRLARNWFIDLGANRADIKISAELLEH
VMGLKLKNRPISSGSFVSNIQSFESIRNFIGSLTVVALVDLPFVLLFATIVALINIYLVI
PILLGALFLLVYAMLAQRKMHSLSLDAMQAGSMRNATLYDGIANLETIKSLNIESKTQTD
WEKTNLFLTHNAAKMRLIAASITQGAHWTQQIVGVSVIIIGVYLIIEGQISQGALIASYM
LSVRAMSPISQTAGLLSQYHYAATAYDSLDNLMALETERATDKDWISPNFVRGEIEFKNV
NFRYSEEDEYVLKDVSFKIQPGESIALLGRNGSGKSTIEKLILGLYEPESGSVMVDGINL
KHFDPAVLRRHIGYMPQENTLFFGTLKENITITNPFVSDEQILKVTKFCGLNSLLQTHSA
GLELPVGEQGRLLSGGQKQAVALARALVGEPPILLFDEPTGSFDYACRKDFVQRVPEIAK
GKTLLMITHNINLIQKASRVMVMDSGKVIADGPTETVLEALRQGRVGSLKV
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaaaaaatcatcaacgatcctctaacagaatgtctgttaatcctttgtcgtttt
catgacagaaacacgactcgcgataaccttgtatccggattacccttaaataacggtcaa
ctcagtccctcacattttgagcgcgctgctaaacgtgccgatttagcgagcaagttcgcc
aaacgcaaattaacccaaatcaatagctctttgatgccggcgatactgattctcaaggat
gacgataacgcacaaagcgcttgtgtattacttgccgtcacagacggcaatgcccaactg
atttatcccgacttgcccgacaccgtagtggaaaagccactttaccagctggaaagcgac
tacagcggtcaagtgatttacgttcgtcccgaattccacttcgatagccgtgctacccag
tttacccaaaacactatgcactggttttggggggttattaaagaaaatcacggcttatat
cgagatatcttaattgcctcgatttttatcaatctgtttgccattgccatgcctttattt
gtcatgaatgtctatgacagggttgtgcctaaccataccactgaaactctgtggatgctg
gccataggtatcggcttggtgatgtgcgccgaactcgctttacggctggcaagaaactgg
tttattgatttaggcgccaaccgtgccgacatcaaaatatcggctgaactgcttgagcat
gtcatggggctgaaattaaaaaatcgcccaatctcatcgggctcttttgtttccaatatc
cagtcatttgaatcgattcgcaactttatcggctccttgaccgtagtagcgctggtagac
ctgccattcgtactgttgtttgccaccatcgttgccttgatcaatatctatctggttatc
cccatactgcttggcgctttgtttttactggtttatgccatgctcgcacaacgcaaaatg
catagcctgtcgctagatgccatgcaagccggttcgatgcgtaatgccactctatatgat
gggatcgccaatctagaaaccataaaaagcctcaatatcgaaagtaaaactcaaaccgat
tgggaaaaaaccaatctgtttttgacgcataacgcagcgaaaatgcgcttaattgcagcc
tccataacccaaggcgctcactggacacagcagattgtcggcgttagcgtgattatcatc
ggggtttatttaataattgaaggccaaatcagccaaggggcgttgattgcttcctatatg
ttaagtgtcagggccatgtcgccaatcagccagacagccggactattgtctcaatatcac
tatgccgcgaccgcttatgattctctggataacctaatggctttggaaaccgagcgcgcc
accgataaagactggatatcaccgaatttcgtccgcggtgaaatcgaattcaaaaacgtc
aatttccgttatagcgaagaagatgaatatgtcctaaaagatgtcagcttcaaaattcaa
ccgggggaaagcatcgctctattaggacgcaacggttccggcaaatccactatcgagaaa
ttgattctgggcctttacgaaccggaatccggtagcgtcatggtggatggcatcaattta
aagcactttgatccagccgtattacgtcgtcatataggttatatgccgcaagaaaacacc
ttgtttttcggcaccctaaaggaaaacatcactatcaccaacccttttgtcagcgatgaa
cagatattaaaggtaaccaagttctgtggacttaacagcttattgcaaacacattcggcc
ggtttggaattacccgttggtgagcaggggcgcttgctttccggaggacaaaagcaagcg
gtcgccttggcacgcgctttagtcggtgaacctccgattttattatttgacgagcctacc
ggttcgtttgactatgcttgtcgcaaagactttgtgcaacgcgtgcctgagatcgccaaa
ggcaaaaccttattaatgattactcacaatatcaatttgattcaaaaagccagtagagtt
atggtcatggatagcggcaaggtaatcgccgacggaccgactgaaaccgtacttgaagct
ttacgccaaggtcgtgtagggagtttgaaggtatga
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