Thiomicrorhabdus sediminis: FE785_09075
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Entry
FE785_09075 CDS
T05983
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig03030
DNA replication
thig03430
Mismatch repair
thig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE785_09075 (holA)
03430 Mismatch repair
FE785_09075 (holA)
03440 Homologous recombination
FE785_09075 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thig03032
]
FE785_09075 (holA)
03400 DNA repair and recombination proteins [BR:
thig03400
]
FE785_09075 (holA)
Enzymes [BR:
thig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE785_09075 (holA)
DNA replication proteins [BR:
thig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FE785_09075 (holA)
DNA repair and recombination proteins [BR:
thig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FE785_09075 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QCU90767
UniProt:
A0A4P9K8W8
LinkDB
All DBs
Position
complement(1997058..1998095)
Genome browser
AA seq
345 aa
AA seq
DB search
MILASAFLKQLQTSQLDIKPIYLLYGEEPLFLRDCLDGLRNRLTEQGYLAGDVYDVDANA
DWQSLQMDTQAGSLFAETRMILVNLPKGSPGKDGTKFFQDWCALNHANGNLPPEVVLVVL
CERLDSRQVKAKWVSAIESAGLVVQAKPVPSNALPQWCLNQAQVYGLSLENEAASLLAER
VEGNLLAADQELVKLSLILPPGSTISAEQVKQHVVDQAHYQLFALATEMLMGNRQHSLQM
LTRLQQEGIEAPVILWLIAKELRQLIELAKLTEQVNLNQAFKQCRIWSSRQTEYAQALKR
QSQHSWQALLKQALEIDLMIKGIQPILNDREVWSAMSALIAKIAQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgattttagccagtgcgtttttaaaacagttacaaacatcgcagttggatatcaaaccc
atctatctgctttatggcgaagaaccactgtttttacgcgactgtctggatggcttgcgt
aaccgcttaaccgagcaaggttatcttgccggtgatgtttatgatgtagatgccaatgcc
gattggcagagtctgcagatggacacccaagcaggctcgctatttgccgaaacacgcatg
attctagtcaacttgccgaaggggtcaccgggtaaagacggcactaaattttttcaggat
tggtgtgcattaaaccacgctaatggcaacttgccgccagaggtggtgttggtggtgtta
tgcgaacgtttggacagtcgccaggttaaagccaagtgggtttcggcgattgagtctgcc
ggccttgtggtacaagccaagccggtaccgagcaatgccttaccacagtggtgtttgaat
caggcgcaggtctacgggttaagtttggaaaacgaagccgccagcctattggccgaacgg
gttgaaggcaacttattggctgccgaccaggagctggtgaaactgtcattgattttacct
cccggttcgacgatcagcgccgagcaggtcaagcaacatgtggttgatcaagcgcattat
caactgtttgccttagcgaccgagatgctgatgggtaatcgacagcacagtttgcagatg
ttaacccgtttgcagcaagagggtattgaggcaccggttattctctggctgatcgctaaa
gagttacgccagttaattgaactggccaaattgaccgagcaggtcaatttgaatcaggcg
tttaagcaatgcaggatctggtcatcccggcagacagagtatgcccaggctttaaaacga
cagtcgcagcatagttggcaggcgttgttgaaacaagcgctggagatcgatctgatgatt
aagggcattcaaccgattctgaatgatcgtgaggtttggtcggcaatgtcggcgttgatt
gcgaagatcgcccaatag
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