KEGG   Thiomicrorhabdus sediminis: FE785_09075
Entry
FE785_09075       CDS       T05983                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
thig  Thiomicrorhabdus sediminis
Pathway
thig03030  DNA replication
thig03430  Mismatch repair
thig03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FE785_09075 (holA)
   03430 Mismatch repair
    FE785_09075 (holA)
   03440 Homologous recombination
    FE785_09075 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thig03032]
    FE785_09075 (holA)
   03400 DNA repair and recombination proteins [BR:thig03400]
    FE785_09075 (holA)
Enzymes [BR:thig01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FE785_09075 (holA)
DNA replication proteins [BR:thig03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FE785_09075 (holA)
DNA repair and recombination proteins [BR:thig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FE785_09075 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: QCU90767
UniProt: A0A4P9K8W8
LinkDB
Position
complement(1997058..1998095)
AA seq 345 aa
MILASAFLKQLQTSQLDIKPIYLLYGEEPLFLRDCLDGLRNRLTEQGYLAGDVYDVDANA
DWQSLQMDTQAGSLFAETRMILVNLPKGSPGKDGTKFFQDWCALNHANGNLPPEVVLVVL
CERLDSRQVKAKWVSAIESAGLVVQAKPVPSNALPQWCLNQAQVYGLSLENEAASLLAER
VEGNLLAADQELVKLSLILPPGSTISAEQVKQHVVDQAHYQLFALATEMLMGNRQHSLQM
LTRLQQEGIEAPVILWLIAKELRQLIELAKLTEQVNLNQAFKQCRIWSSRQTEYAQALKR
QSQHSWQALLKQALEIDLMIKGIQPILNDREVWSAMSALIAKIAQ
NT seq 1038 nt   +upstreamnt  +downstreamnt
gtgattttagccagtgcgtttttaaaacagttacaaacatcgcagttggatatcaaaccc
atctatctgctttatggcgaagaaccactgtttttacgcgactgtctggatggcttgcgt
aaccgcttaaccgagcaaggttatcttgccggtgatgtttatgatgtagatgccaatgcc
gattggcagagtctgcagatggacacccaagcaggctcgctatttgccgaaacacgcatg
attctagtcaacttgccgaaggggtcaccgggtaaagacggcactaaattttttcaggat
tggtgtgcattaaaccacgctaatggcaacttgccgccagaggtggtgttggtggtgtta
tgcgaacgtttggacagtcgccaggttaaagccaagtgggtttcggcgattgagtctgcc
ggccttgtggtacaagccaagccggtaccgagcaatgccttaccacagtggtgtttgaat
caggcgcaggtctacgggttaagtttggaaaacgaagccgccagcctattggccgaacgg
gttgaaggcaacttattggctgccgaccaggagctggtgaaactgtcattgattttacct
cccggttcgacgatcagcgccgagcaggtcaagcaacatgtggttgatcaagcgcattat
caactgtttgccttagcgaccgagatgctgatgggtaatcgacagcacagtttgcagatg
ttaacccgtttgcagcaagagggtattgaggcaccggttattctctggctgatcgctaaa
gagttacgccagttaattgaactggccaaattgaccgagcaggtcaatttgaatcaggcg
tttaagcaatgcaggatctggtcatcccggcagacagagtatgcccaggctttaaaacga
cagtcgcagcatagttggcaggcgttgttgaaacaagcgctggagatcgatctgatgatt
aagggcattcaaccgattctgaatgatcgtgaggtttggtcggcaatgtcggcgttgatt
gcgaagatcgcccaatag

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