Thiomicrorhabdus sediminis: FE785_09820
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Entry
FE785_09820 CDS
T05983
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FE785_09820 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thig03400
]
FE785_09820 (mutM)
Enzymes [BR:
thig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FE785_09820 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FE785_09820 (mutM)
DNA repair and recombination proteins [BR:
thig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FE785_09820 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Zn_ribbon_6
DUF7577
Ribonuc_L-PSP
DUF7351
Zn_ribbon_SprT
Zn_ribbon_IS1595
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QCU90903
UniProt:
A0A4V1HI11
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All DBs
Position
2158047..2158874
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETTRQGIRPNAEKQTIEKIIIRNGKLRWPVPEKIATLLKDTTIDNIGRRGKYL
LLQTPKGTLLIHLGMSGNLRILPQGSPVQKHDHVDIVLKNGFVIRLNDPRRFGSVLWHDI
NEGGVSEHKLLSKLGPEPLSDEFNSDYFYQLSRQRKMSIKSFVMNSNIVVGAGNIYANES
LFLSGIHPEKLAGKLTKKQCETLVNNIKQVLAAAIEQGGTTLKDFLSPSGKPGYFVQKLN
VYGRDGASCPQCGATIERIIQNQRASFFCRKCQKK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagtcgaaaccacccgccaaggcattcgccctaatgccgaaaaa
caaaccattgagaagatcattattcgcaatggcaaactgcgttggccggttcctgaaaaa
attgccaccctgctcaaagataccaccatcgacaatatcggtcgtcgcggaaaatacctg
ttattgcaaaccccaaaaggcaccttgctgattcatttgggtatgtcgggcaacctacgc
attctgccacagggcagcccggtgcaaaaacacgatcatgtcgacatagttttgaaaaac
ggctttgtcatccgcttaaacgacccacgccgttttggttccgtgctctggcacgatatc
aacgaggggggtgtcagtgaacataaattgcttagcaaactcggtccagaacctttatcg
gatgagttcaatagcgattatttctatcaactgtcgcgccagcgcaaaatgagcattaaa
agctttgtcatgaacagtaatattgtcgttggcgccggtaatatctatgccaatgaatcg
ctgtttctgagtggaattcatcccgagaaattggccggcaagctgactaaaaaacagtgc
gaaaccttggttaacaatattaaacaggttttggccgctgctattgaacaaggcggcacc
acgctgaaagattttttatcgccatctggtaaacccggctattttgtgcaaaaactcaat
gtctacggcagggatggcgcaagctgcccccagtgcggcgccaccatcgaacgcattata
caaaaccaaagagcgagctttttctgccgtaaatgccagaaaaaatag
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