Thiomicrorhabdus sediminis: FE785_10475
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Entry
FE785_10475 CDS
T05983
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
thig
Thiomicrorhabdus sediminis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thig03021
]
FE785_10475 (rpoH)
Transcription machinery [BR:
thig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FE785_10475 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
HTH_10
Sigma70_r1_2
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
QCU91198
UniProt:
A0A4P9K898
LinkDB
All DBs
Position
2311512..2312399
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AA seq
295 aa
AA seq
DB search
MSKKINQQVKASQSLPALASNPANLIPGQNLETYLQTIQAITPLNAEEERTLAEKLYYEK
DVEAARHLILASLRYVVPVARSYKGYGLPLGDIIQEGNIGLMKAVKRFDPAENVRLMTFA
VHWIRAEINEYVIRNWRIVKTATTKAQRKLFFKLRSTKRALEWFSDKDADQVAQELGVSK
KDVLEMETRLYGKDLPVDMREEDDNENTTFPVLISTEADPETAILQQDHADYELTRMQNA
LATLDDRSRSILQQRWLSEKKVGLKELSQQFGVSMERIRQIEQQALNKLKGQLTA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaagatcaatcaacaagtcaaagcctctcaaagtttgccagcattagccagc
aacccggctaatctgattcctgggcagaatttagagacttatctgcaaaccatacaagcg
attacgccacttaacgcggaagaagaacgcaccttggcggaaaagctttattatgaaaaa
gatgttgaagccgctcgccatttgattcttgcttctttacgttatgtagtgccggtagca
cgatcttataagggctacggcttgccgctcggagatattatccaagagggtaatatcggc
ctaatgaaagcggttaagcgctttgatcccgcagaaaatgtacgcttaatgacttttgcc
gtacattggattcgcgccgaaatcaatgagtatgtcattcgtaactggcgtattgtcaaa
accgcaaccaccaaagcacaacgcaaactgttttttaaactgcgcagcactaagcgcgcg
ttagaatggtttagcgataaagacgccgatcaggttgcgcaagaattgggtgtaagcaaa
aaagacgttctggaaatggaaacacgtctttatggtaaagacctgccggttgatatgcgc
gaagaagacgacaatgaaaataccaccttcccggtattgatctcgacggaagctgatccg
gaaaccgctatcctgcaacaggatcatgccgattatgagctaactcgcatgcaaaatgct
ctggcaaccttggatgatcgtagccgcagcattctacagcaacgctggctaagtgagaaa
aaagtcggtttaaaagaactttctcagcaatttggcgtctcaatggagcgtattcgccaa
atcgagcaacaggcactgaataagcttaaaggccaacttacggcataa
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