Thiocapsa sp. M50B4: KFB96_01020
Help
Entry
KFB96_01020 CDS
T07253
Name
(GenBank) RHS repeat protein
Organism
thim
Thiocapsa sp. M50B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
QVL49150
LinkDB
All DBs
Position
212560..215937
Genome browser
AA seq
1125 aa
AA seq
DB search
MGDPADARLEVLADGSIGFFDGTGAGCRFEHLPESEPVRDAVDGWTLLRLERHFAVRKKG
GLTWYFPLQRGDWREILVDAIVDACRNSLHFIRGPEGLAQVVESAGRRLDVTSKGGLVER
IALHHPDFPEQRTLARYAYDENGSLTHVYDALDNPYTFGWHADGRLAQHTNRTGLTFYYE
YDAAGRCVHAWGDGGLYDYHFQFDPAGLWTNYTDSLGQRWSVEMDELGQIVRETDPLGGV
TSYTYDPAGRTTSVTDPAGRTTAYGYDERGNLITLTRPDGKAIVTEFNAADKAVRITDPN
GATWGQEWDSRDLLTMQVTPLGAESHYHYDTQGQLVAFVNPRGARTGLAFDAVGNLTRLT
DALNHATHFAYDALGNITAKSDPLRQQTQYAYDLKGRLTRTVLPSGASIACDYDPEDNLT
QYTDENRARTRLEYFGLGEIQRRIQPDGHKVEYHYDSEERLVGVTNQRGETYHLGRDALG
RIVEEVDYWGQARRYAYDASGHLTSSTDPLGRTIRYATDPLGRILKKTLPDGFVETFAYD
ANGNLVETANAHAAIKRQFDAEGRLTEESQGAFSIKNSYDATGNRVARETSLGNAVAYEF
DALDQAVALRINQDEPIRIERDAAGRIAREQLSPHLSRQFGYSADGYLTEQAVSANGSPI
FATRFEYDAAGNLTQRSDSQYGVDVYRYDPLGRITEHLDPQRRITRYLNDPAGDRLRTRI
VEGTRQRIVGGGVVEGEWSREGEYEGTYYRFDRAGNLAERRDGERDLRLVWDANQRLIES
YGNGTVTRYGYDPLGRRLFKETGENRSLFYWDGDALVGESVVALNRPKEPMPAVAGNVVA
IAERRENAQAAVPQKAREYVYYPETFEPLALVEGAGTVRHVYHYHNDPNGCPTGLTDAGG
EVKWGAIYTAWGKISKLHANGVENPIRLQGQYSDAETGLHYNRYRFDDPVLGCFVSQDPL
RMMVGPNLYWYAGSRFFLADPVGLSCTVDANANRWRNRQTGRFQAAPTDISDLVHNGRID
YNDVQAFAAHHGLPNNWVPSANFPAGGFRHQTTTATHNMSIHGHGVNPNAVANFPGSNAA
TGPTASIRRQPIGGGPAENFRTSGTWGSFGSDPNGAHIPMDNSPY
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
gtgggagaccccgccgacgcgcggctcgaagtgctcgccgacggttccatcggcttcttc
gacggaaccggggcggggtgccgattcgagcacctgccggagtccgagccggtgcgcgac
gccgtcgacgggtggacgctcctccgactcgaaaggcacttcgccgtccgcaagaagggt
ggactcacgtggtatttcccgctccagaggggcgattggcgggagatcctcgtcgatgcc
attgtcgacgcgtgccgcaactccctgcatttcatccgcggtcccgagggtctcgcgcag
gtcgtcgagagcgccggtcgacgcctggatgtcacgagcaagggcgggctcgtcgagcgg
atcgccctgcaccacccggacttccctgaacagcgcaccctcgctcgatacgcgtacgac
gagaacggcagtctcacccacgtctacgatgccctcgacaacccttataccttcggctgg
cacgcggacggccgcctcgcccaacacaccaaccgcacgggcctcaccttttactacgaa
tacgacgccgccggccgttgcgtgcacgcctggggcgacggcggtctctatgactaccat
ttccagttcgaccccgcaggactctggaccaactataccgacagtctcggccagcgctgg
tcggtcgagatggacgagttggggcagatcgtccgcgagacggatccccttggcggggtg
acgagctacacctacgacccggcgggtcgaacgacgagcgtaacagacccggccgggcga
acgacggcctacggctatgatgagcgggggaacctcatcaccctgacccgtcccgacggc
aaggccatcgtcaccgagttcaacgccgccgataaagcggttcgcatcaccgacccgaac
ggggcgacctggggccaggaatgggacagccgggatctcctgacgatgcaggtgaccccc
cttggcgccgagtcgcactaccactacgacacacaaggccaactcgtcgccttcgtcaat
ccccgaggcgcgcgcaccggcctcgctttcgacgccgttggcaacctcacgcgccttacg
gatgccctgaaccacgcgactcacttcgcctacgacgccctcggcaacatcacagcaaaa
tccgatcccctgaggcaacaaacccagtacgcctacgacctaaagggccggcttacgcgc
acggtgcttccgagcggcgccagcattgcatgtgattacgaccccgaggacaacctcacc
cagtacaccgacgagaaccgggcccggacccggctggaatacttcggtctgggggaaatc
cagcgtcgcatccagcccgacggccacaaggtcgagtatcactatgacagcgaggagcgc
ctggtcggcgtgaccaaccagcgcggtgaaacctaccacctcgggcgcgatgcgctgggc
cgcatcgtcgaggaggtggactactgggggcaggcgcggcgctatgcctacgacgcgagc
ggccacctgacctcgtccaccgatccgctcgggcgcaccatccgatacgccaccgatccc
ttgggtcgcatcctcaaaaaaaccctgcccgatggcttcgtcgagacctttgcctacgac
gcgaacggcaacctggtcgagaccgcgaacgcacatgccgccatcaagcgccaattcgac
gccgagggccgcctgacggaggagtcgcagggggccttttcgatcaagaacagctacgac
gccaccggaaatcgggtcgcacgcgagactagcctgggcaatgcggttgcttatgagttc
gatgcgctcgatcaggccgtggccctgcgcatcaatcaggacgagccgatccgcatcgag
cgggatgccgccggcaggattgctcgcgagcaactcagcccgcacctctcgcgccagttc
ggctacagcgccgacggctatctcacggagcaggctgtctcggccaatgggtcgccgata
ttcgccacgcgcttcgaatacgatgcggcgggcaacctcacccagcgcagcgacagccag
tatggcgtcgatgtttatcgttatgatccactgggtcggattaccgagcaccttgacccg
cagcggcggattacccgctatcttaatgatccggcgggtgatcggttgcggacgcggatt
gtcgaagggacgcgccagcgcattgtgggcggtggcgtggtggagggggagtggagccgg
gagggcgagtatgaggggacttactaccgatttgatcgggccgggaatttggctgagcgg
cgggatggggagcgggatttgcgcttggtgtgggatgccaatcagcgactcatcgagagc
tatggtaatgggacggtgacccgctatggatacgatcccctcggtcggcggcttttcaag
gagaccggggagaatcgctcgctgttctactgggatggcgatgcgttggtaggggagtcg
gttgttgcactcaaccggccgaaggaacctatgcccgcagtcgcgggcaacgtcgtcgcc
attgccgagcggcgagagaacgcccaagcggcagttccgcagaaggcgcgggaatacgtc
tattatccggagacttttgagccattagctctagttgagggcgcgggaactgtccgacac
gtctaccactatcacaacgatccgaatggttgtccgaccggcttgacagatgctggcggc
gaggtgaagtggggggcaatctatacggcatgggggaagatttcgaaactacatgccaac
ggggtcgagaatccgatacggttgcaggggcaatactccgacgcagaaaccggtttgcac
tacaaccgataccgttttgatgatccggttttgggatgcttcgtatcccaggacccgctc
agaatgatggttggcccaaacctttattggtacgctgggagcaggttctttctagcggac
cctgtcgggctatcctgcaccgtcgacgccaatgctaaccgatggcgcaaccggcagacc
gggcgtttccaggccgcgccgaccgatatctcagaccttgttcacaacgggcgtatcgat
tataacgatgtgcaggcttttgcggcccaccatggtcttcccaacaactgggtgccgtct
gccaatttcccagcaggcggctttaggcaccagactacgacagccacgcataatatgtcg
atccacgggcatggcgtcaatccgaacgccgtcgccaacttccccggttccaacgccgct
acgggcccgaccgcctcaattcgcaggcagccgatcggaggtgggccagccgagaacttt
cggaccagcggcacctggggctccttcggctccgacccgaatggtgcccacattccgatg
gataattcgccgtactga
DBGET
integrated database retrieval system
