KEGG   Thiocapsa sp. M50B4: KFB96_01115
Entry
KFB96_01115       CDS       T07253                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
thim  Thiocapsa sp. M50B4
Pathway
thim03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:thim00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KFB96_01115 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:thim02044]
    KFB96_01115 (tssM)
Secretion system [BR:thim02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KFB96_01115 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_33 DUF4131 Rad17
Other DBs
NCBI-ProteinID: QVL49165
LinkDB
Position
236583..240134
AA seq 1183 aa
MKVLFRFLGSRWFLTLLGTIALALLIWFIGPLVGVAGMEPLASPHSRYIAVGALFGVWGL
VRIGSVVRARLRNRRLMEQLASGPAAAPDPAKIASEEELQVLRERFDAALAALKGSEVRH
RLGGRWVYQLPWYLIIGPPGCGKTTALMNSGLRFPLAERLGQDAIQGIGGTRNCDWWFTD
EAVLIDTAGRYTTQDSYEQVDSAAWQGFLGLLKKHRPRRPINGVLVAVSLADLMQQSQTE
RAAHAAAIRQRIQELCKTFGIAIPVYVLFMKADLVAGFMEFFADLNKEGREQVWGVTFPY
DPEEKTPAALSTFAAELTALVERLDQRLLTRMEQEREPGKRSLVFSFPRQFNALGDALEQ
FLQDAFTPSRFEIRPLVRGVYFTSGTQTGTPIDRVLGGFAGSFGLARQGPLPFKGTGKSF
FLTRLLRDLIFTETGLAGLNPRLERRRRWLRRGAYAGVFTILLLAGAAWTTSYSRNLAYI
DEVAQRTVEIESKIDAIPVEERNPLGILPLLDAARAIPGGYADRGESVPISMGLGLYQGG
KLGSQAERAYDRILAKALLPRVILRLEEQVREAGGDPDYLYDALRVYLMLDSDEHYDPAA
VQYWVGRDWQRSLPRETTTEQQEALRDHLSALLVRRPAPLPIDLDGALIADARVILNRTP
PAERIYARLKQDGPGDDLPDFTISDAGGDFAKLVFARRSGRPINQGVPALFTYDGYHRGF
TSASSQLIEAAANEAWVLGPDAPLTSGSEGARRVLEEVRERYLRDYVVEWTALLEDIDLV
AVRDLHHASEVARILADPEYSPLKRLLVAAARQTELDRPPQADASAADQAGGTLQGFRQR
VESYFDDTDPGAPSAQSPEAYVTRRFGWLHDLVRSDEQRQAPIERVLVSMGQLQLHLSSV
AAAATTGRGLLVPGESAEIRDAKALAAQLPAPIGGLVGTLAQDSANIAAGGARAQLNNIW
TAEVLPFCREAIHDRYPFVAGTARETTLHDFGRVFGPDGLIDAFFKAHLSASVDTARPTW
RWVDKAIGIPDEVLAQFQRAAVIREAFFMSGGKTPSVEFELQPRGMDARLNQFTLDLGGQ
IVDYRHGPLRTQKLQWPPPDGALRARLVFVDTSGGGPSLTEEGPWAWFRVLDRSRLTATN
QPELFRLTFSVAGMSAQFDLRAISVRNPFKLDELRGFRCPGRL
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgaaagtgctgtttcgattccttggctcacgctggtttctgaccctgctcggaacgatc
gcgctggcgctgctgatctggttcatcggcccgctggtcggtgttgcaggcatggagccc
ttggcgtcgccgcacagccggtacatcgccgtcggggccctgttcggggtctggggtctg
gtgcggatcggctccgtcgtgcgtgcgcggttgcgtaatcgccgcttgatggagcagctc
gcgtcgggcccggcggcggcgccggacccggccaagatcgccagcgaagaagagctgcag
gtcctgcgcgagcgcttcgatgccgcattggcggcgctcaaggggtccgaggtccggcac
cgactgggcggacgctgggtctaccagctgccttggtatctgatcatcggtccgcccggc
tgcggcaagacgacggcgcttatgaattcggggctgcgcttcccgctcgcggagcgtctc
ggtcaggacgccatccagggtatcggcgggacccgcaattgcgactggtggttcaccgac
gaggcggtcttgatcgacaccgccggacgctacaccacgcaggacagctacgagcaggtg
gacagcgccgcctggcagggtttcctcggcctgctgaagaagcaccggccgcgacgcccg
atcaacggggtcttggtagccgtcagcctcgccgacctcatgcagcagagccagacggag
cgcgcagcccatgcggcggcgatccgccagcgcatccaggagctgtgcaagaccttcggc
atcgcgatcccggtctatgtgctcttcatgaaggcggatctcgtggcgggcttcatggag
ttctttgcggatttgaacaaggaggggcgcgagcaggtctggggcgtgaccttcccctac
gaccccgaggagaagaccccggcggcactctcgacctttgcggcggagctgacggccctc
gtcgagcgtctcgaccaacgtctgctgacccgcatggagcaggagcgcgaaccgggaaaa
cgctccctggtgtttagcttcccgaggcaattcaatgccctcggtgatgccctcgagcag
tttttgcaggatgccttcacaccgtcgcgtttcgagattcgtcctctggtgcggggtgtc
tatttcaccagcggcacgcagaccggtaccccgatcgaccgagtgctgggcgggtttgcg
gggagtttcggtcttgcccgtcagggtccgctccccttcaaagggacgggcaagagtttc
tttctgacgcgtttgctgcgcgatctgatcttcacggagacggggcttgccgggctcaat
ccgcgtctggagcgtcgtcggcgttggctcagacgaggggcctatgcgggggtgtttacg
atcctgttgctggccggcgcggcttggaccacgagctactcgcgcaacctcgcctacatc
gacgaggtcgctcagcgcacggtggaaatcgagtccaagatcgatgccatcccggtcgaa
gagcgcaacccgctcgggatcctgcccctgctggatgcggcccgcgcgattcccggcggg
tacgccgaccgcggcgagtctgttcccatcagtatgggtcttggcctctaccaaggtggc
aagctcggatcccaggccgagcgggcctatgaccgcattctcgccaaggccctgctgccg
agggtcatcctgcgtctggaggagcaggtccgcgaggccggcggcgaccccgactatctc
tacgatgccttgcgtgtctacctcatgctcgacagcgatgagcactacgatcccgcggcc
gtgcagtattgggtcgggcgcgattggcagcgcagtctgccgcgcgagaccaccaccgag
cagcaggaggcgttgcgcgatcatctgtcggccttgctggtgcgccgacccgcacccttg
ccgatcgatctcgacggggccctgatcgccgacgcgcgggtcattctcaaccgaacgccc
ccggccgagcgcatctacgcccgtctcaagcaggatggaccgggcgacgaccttcccgat
ttcaccatcagcgatgccggcggagacttcgccaagctggtgtttgcccgtcgcagcgga
cggccgatcaatcagggcgtgcccgcgctctttacctacgacggctatcaccgtggcttt
acgagcgcgagcagccaactgatcgaggcggcagcgaacgaggcttgggtcttgggtccg
gatgccccccttacttcggggtcagaaggcgcgcggcgcgtgctcgaggaggttcgcgag
cgctatctacgcgactatgtcgttgagtggacggccttgctcgaggatatcgatctggtc
gccgtgcgcgatctgcatcacgcatctgaggtcgcacgcatccttgccgatccggaatat
tcaccgctgaagcgactgcttgtcgcggccgcccgccagaccgagctggaccgacccccg
caggccgatgcgtccgccgcggatcaggccggagggaccctgcagggattccgtcagcgc
gtcgagagctacttcgacgacaccgatccgggtgcgccgtccgcgcagtccccggaggcc
tacgtgacgcgtcgttttggctggttgcatgacctggtgcgatccgacgagcaacgccag
gcccccatcgaacgggtcttggtctcgatggggcagttgcagctgcacttgtcgtccgtg
gctgcggccgcgaccacgggccgcggcctgctggttccgggcgagagcgccgagatccgc
gatgccaaggcgcttgcggcgcagctcccggcgccgatcggcggcttggtcggaaccctt
gcacaggacagtgccaacatcgccgccggtggcgcgcgcgctcaactgaacaatatctgg
acggccgaggtactgcccttctgccgcgaggcgatccatgaccgctatcccttcgtcgcc
ggaaccgcgcgcgagaccaccttgcatgacttcggccgggtcttcggcccggacgggctg
atcgacgccttcttcaaggcgcacctgagtgcgtccgtcgatacggcacgcccgacatgg
cgttgggtcgataaggccatcgggatcccggacgaggtgttggcccagtttcagcgcgct
gccgtcatccgcgaggccttcttcatgagcggaggcaagaccccgtcggtcgagttcgag
cttcagccgcgcggcatggatgcccgcttgaaccaatttaccctggatctcggaggacag
atcgtcgattaccggcacggtccgttgcgcacgcaaaagctgcaatggccgccgccggac
ggcgcattgagggcgcgtctggtcttcgtcgacaccagcgggggcggacccagtctgacg
gaggagggtccttgggcctggttccgcgtgctcgaccgttcacgactcaccgccaccaat
caacctgagctgtttcgactgaccttctccgtggccgggatgtctgcgcagttcgatctg
cgcgcgatcagcgtgcgcaatcccttcaagctcgacgagctgagagggtttcgctgtccg
gggcgtctatga

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