Thiocapsa sp. M50B4: KFB96_03270
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Entry
KFB96_03270 CDS
T07253
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
thim
Thiocapsa sp. M50B4
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KFB96_03270 (ltrA)
Enzymes [BR:
thim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
KFB96_03270 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
RdRP_1
Motif
Other DBs
NCBI-ProteinID:
QVL51259
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All DBs
Position
complement(710122..711606)
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AA seq
494 aa
AA seq
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MRQRNRRRPSWKSEGFVVPFETGGQHNPRSREGTLLCSRNQRVEDQGIAMSLITPETIRT
LQRKLYAKAKQEPAYRFYALYDKVYREDILRHAWNLVRSNAGSPGIDGVSFAAIEQGEGV
EGFLQEIAQELREKSYRAQPVRRVMIPKGDGRERPLGIPTIRDRVVQMAVKLVIEPIFEA
DFTPHSYGFRPKRSAHDAIDDIANALWAGHTHVIDADLSSYFDTIPHANLMAVVAERIVD
GRLLALLKQWLKAPVIGVDDQGKRRTVGGGKANRVGTPQGGVISPLLSNLYLHLLDRIWD
RHRLKDELGAHIVRYADDFVVLCKQGVEEPLNVVRHVMDRLGLTLNETKTHVVDAKETGF
DFLGFTLQMSRGANTGKWYPNVRPSDKAVGKITAKVTELTRRELTCIPLDDVVGSVNRSL
RGWANYFHFRNSSLAMSKVRNHAEQRLRIHLRKRHKVKTWGAGYAKFPSHDLYDRHGLHP
LPKGPGWKTAHALV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ataaggcaacgaaatcgtcgccgcccgtcatggaagtcggaggggttcgtagtaccgttt
gagactgggggacaacacaaccctcggtcgagggaagggaccctactttgttcacgcaac
caacgagtggaggatcaggggattgccatgtcgctaatcaccccggagacgatcaggaca
cttcagaggaagctctacgctaaggccaagcaagaaccggcctaccgcttctacgcgctc
tatgacaaggtgtaccgggaggacatcctccgtcacgcctggaatcttgtccggtcaaac
gcaggcagccccgggattgacggggtcagcttcgcggccattgagcaaggcgaaggggta
gaggggtttctgcaggagatcgcacaggaactgcgcgagaaaagctaccgcgcccaaccg
gtacggcgtgtgatgatccccaaaggggatggccgcgaacggccgctggggatacccacc
atccgcgaccgcgtggtgcaaatggccgtcaagctggtgatcgagccgattttcgaggcg
gactttacgccgcactcctatgggtttcgacccaaacgctcggcgcacgatgccatcgac
gatattgccaacgcactctgggccggacacactcatgtcattgatgccgatctgtcgagc
tacttcgacacgatcccccacgctaacctcatggcggtggtggccgaacgcattgtcgac
ggacgcctcctggcgcttctgaagcaatggctgaaggcacccgtcatcggcgtggacgat
caaggaaaacgcaggacggtcggtggaggaaaagccaaccgggttggcacgccgcaaggt
ggtgtcatctccccgctgttgtcgaatctctacctgcatctgctcgatcgcatctgggac
cggcatcggctgaaagacgagctgggggcacacatcgtccgctatgcggacgactttgtc
gtgctctgtaagcagggtgtggaagaaccgctgaacgtggtgcgccacgtcatggatcga
ctgggtttgacgctcaatgagaccaagacccacgtggtggacgccaaggagacgggcttt
gactttctgggttttacgctccagatgagtcgaggcgccaacaccggcaaatggtaccca
aacgtacgtccgtcggacaaagctgtgggtaaaatcacggcgaaagtgacggaactaacg
cgacgggagttgacctgcatcccgctggatgatgtggttggaagcgtgaaccgcagcctt
cgcggctgggcgaactatttccatttccgcaattccagtctggcgatgagtaaggttagg
aaccacgccgaacagcggctgcgaatccacttgcgcaagcgacacaaggtcaagacctgg
ggtgcgggttacgccaaattcccgtctcacgacctctatgaccgccatggactgcaccca
ctcccgaaaggacccggctggaagacggcgcatgccttggtgtga
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