Thiocapsa sp. M50B4: KFB96_03475
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Entry
KFB96_03475 CDS
T07253
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KFB96_03475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thim03400
]
KFB96_03475
Enzymes [BR:
thim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KFB96_03475
DNA repair and recombination proteins [BR:
thim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KFB96_03475
Prokaryotic type
KFB96_03475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QVL49579
LinkDB
All DBs
Position
757721..758398
Genome browser
AA seq
225 aa
AA seq
DB search
MSSGEGLEGVDALARLYLDLVDCRRCPGMQGPPVHGQAVISPVMMVGQAPGTREILQGIP
FCWTAGKTLFRWFESIGIDEPNFRSRALMSAVCRCFPGKAPKGGDRVPDAAEVERCSGWW
RTEVELARPRLIIPVGKLAITQFMASKRLNDVVGARWPYRSPSGLEADLIPLPHPSGAST
WFKMEPGRTLLEKALSLIDAHPAWQEIRTASAVGHPPPAGRSGAA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgggcgagggactagaaggcgtcgatgcgctcgcgcgactgtatctcgatctg
gtcgactgccggcgctgccccgggatgcaggggccgcccgtacatggtcaggcggtcatc
tcgccggtcatgatggtcggtcaagccccgggcacgcgcgagatcctgcagggcatcccg
ttttgttggaccgccggcaagacgctctttcgttggttcgagtccatcgggatcgacgag
ccgaactttcgcagtcgcgccctcatgagcgcggtctgccgctgctttcccggcaaagcc
ccgaaaggcggcgaccgggttcccgacgccgccgaggtcgagcgctgcagcggctggtgg
cgaacggaggtcgagcttgcacggccccgattgatcatcccggtcggcaagctcgccatc
acgcagttcatggcgtccaagcgtctgaacgacgtcgtcggagcgcgatggccctatcgc
tccccgagcggtttggaggccgacctgatcccgctcccgcatccctcgggtgcctcgacc
tggttcaagatggagccgggtagaacgctgcttgaaaaggcgctgtcactgatcgacgcg
cacccggcgtggcaagagattcggactgcgtctgctgtggggcatccgccacctgccggt
cggagcggcgcagcctaa
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