Thiocapsa sp. M50B4: KFB96_05575
Help
Entry
KFB96_05575 CDS
T07253
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
thim
Thiocapsa sp. M50B4
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thim01011
]
KFB96_05575
Enzymes [BR:
thim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KFB96_05575
Peptidoglycan biosynthesis and degradation proteins [BR:
thim01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KFB96_05575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
Motif
Other DBs
NCBI-ProteinID:
QVL49951
LinkDB
All DBs
Position
1220388..1221947
Genome browser
AA seq
519 aa
AA seq
DB search
MPTYPISIRYLSFLLLSLALLGLAGCGSDGGQRTTSGESGTQGDLVAGSDTFPVPAEIQP
NVDFWRHVYGVWSRGEVAIHDNEHMGVVYEVVKLPGPIKEGYTDSQRELVRARRDAHTEQ
LRQLENHIRTGQSLTAGDQALLAKFEQAGSGRGAVYGAADRVRSQRGLRERFHRGIEISG
RYDPAFREIMRSHGVPEDLAYLPHVESSFQTNARSSVGAAGVWQFMPATGRMYMNVNDSI
DDRFDPIVAADGAARYLSQAHRRLGSWPLAITSYNHGQGGMANAKAQFGDDFGGIVKNYR
GPYFGFSSRNFYAGFIAARDVTHNADRYFPEGVRREEPWPHDRLVLQHSMPVNHIAGHYG
VTPYRLADLNMHWRERARDGRAHLPPGSTVWLPAGTKRRVASHPPPVANVMVARAEPKAS
PVARQAIAKAERPAAKSTTTSAAAKPVAKASTKQIAKASAAQQPKKAATAARYHVVKPQE
TLYRVAVQNGITVDELRKLNKMRPDDNKIRPGQKLKVSI
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgccgacctatccgatcagtatcaggtatttgtcgttcctgctgttgtcgcttgccctg
ctcggcttggcgggctgcggcagcgacgggggccaacgcaccacctcgggcgagagcggg
acgcagggcgatcttgtggccggctccgacacctttcccgttccggccgagatccagccg
aatgtggatttctggcgccatgtctacggcgtctggagtcgcggagaagtcgccatccac
gacaacgagcacatgggtgtcgtctacgaggtcgtgaagctccccgggcccatcaaagag
ggctacacggactcccagcgcgagctggtgcgcgctcgcagagacgcccacaccgagcag
ttgcgtcagttggagaaccacattcggaccggacagtcccttaccgcaggcgaccaggcc
ctgctcgccaaattcgagcaggccggcagcggtcgcggtgccgtctacggggcggcagac
cgggtacgcagtcaacgcgggctgcgcgagcggttccatcgcgggatcgagatcagcgga
cgctacgatccggccttccgcgagatcatgcgcagtcatggcgttcccgaagacctcgcc
tacctcccgcacgtggagtcgtcgttccagaccaatgcccgatcgagcgtcggcgcggcc
ggggtctggcagttcatgccggcaaccgggcgcatgtacatgaacgtcaacgacagtatt
gacgatcgcttcgaccccattgtggctgccgacggcgccgctcgttatctgtcccaggcc
caccgccgactcggaagctggccgctcgccatcacctcctacaatcacgggcaaggtgga
atggcgaatgccaaggcccagttcggcgacgacttcggcgggatcgtgaagaactatcgg
ggaccgtacttcggattttcctcgcgtaatttctacgccgggttcatcgccgcccgcgat
gtcacgcacaacgccgatcgttatttccccgagggcgtccggcgcgaagagccttggccg
cacgaccgcctggtcctccagcacagcatgccggtgaaccatatcgcgggacactacggc
gtgaccccctatcgccttgccgacctgaacatgcactggcgagagcgcgcacgcgacggt
cgtgcgcatctgccccccggcagcacggtgtggctcccggccgggaccaagcgacgcgtc
gccagccacccgccgccggtcgccaacgtcatggtcgcccgcgccgagcccaaggcatcg
ccggtggcccgtcaggcaatcgccaaggccgagcgaccggcagccaaatcgacgaccacg
tcggcagcggcgaaacccgtggcgaaagcgtccaccaagcagatcgcgaaggcatctgct
gcgcagcagcccaagaaggcggcgaccgcagcgcgctaccatgtcgtcaaaccgcaagag
acgctctatcgcgtcgcggttcagaacggcatcacggtcgacgagttgcgcaagctcaac
aagatgcggcccgacgacaacaagatccgtccggggcagaagctcaaggtcagcatttaa
DBGET
integrated database retrieval system
