Thiocapsa sp. M50B4: KFB96_06580
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Entry
KFB96_06580 CDS
T07253
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim00061
Fatty acid biosynthesis
thim00071
Fatty acid degradation
thim01100
Metabolic pathways
thim01212
Fatty acid metabolism
thim02024
Quorum sensing
thim04146
Peroxisome
Module
thim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KFB96_06580
00071 Fatty acid degradation
KFB96_06580
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KFB96_06580
09145 Cellular community - prokaryotes
02024 Quorum sensing
KFB96_06580
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
thim01004
]
KFB96_06580
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thim04147
]
KFB96_06580
Enzymes [BR:
thim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KFB96_06580
Lipid biosynthesis proteins [BR:
thim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KFB96_06580
Exosome [BR:
thim04147
]
Exosomal proteins
Exosomal proteins of breast milk
KFB96_06580
Exosomal proteins of breast cancer cells
KFB96_06580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
SnoaL_2
Motif
Other DBs
NCBI-ProteinID:
QVL50125
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All DBs
Position
complement(1433086..1434597)
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AA seq
503 aa
AA seq
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MAHASCPSFGWDACHREPVAPGFRTRMYWSLNEVDPDAVAVLGGHDSIDGWALSYRELTD
SADAFAASLDGGSAKELGAIFCRNSPQAIAAYLGALRHGDAVMLLNARMDAGHLEALMRA
YRPDWVYEPRERHSQLGKGRVREQWGWRLWQPRASRIEEAIHADLALLLSTSGTTGSPRM
VRLSQTNLASNAAAIVAALGIDAEDRALAALPMHYAYGLSVLNSHLHAGAALVVTEESPV
EAGFWQTVAGRQVTTLPGVPMTYQMLMRLNPGPRALASVRSLTVAGGPLAEHLVERMADW
CDASGARFHVMYGQTEATARMSVLPPGMLRSKPGSVGLAIGAGRLSLSPGGELLFAGPNV
MMGYALAREDLALGDCMGGRLATGDLGRIDDDGCAYVSGRLKRMLKIHGHRVSLDVLEQG
LETLLRLPVAVAGEDDRLVVYLEAGSAKAVGSARDALTRRYRLPPSAFEVQVLSELPRTI
NGKLDAAALRALDSGTAEERRRG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcatgcaagctgtccgtcgttcgggtgggacgcctgtcatcgggagccggtggcc
ccgggtttccgcacgcgcatgtactggtcactgaacgaggtcgatcccgatgcggtcgcc
gtgctgggcgggcacgattcgattgacggctgggcactcagctaccgtgaactgaccgat
tcggccgatgcgtttgcggcttccctggacgggggatctgcgaaagagctcggcgccatc
ttctgccgcaactcgccgcaggcgatcgccgcctatctcggcgccctgcgtcatggcgat
gcggtgatgttgttgaacgcccggatggatgcggggcatctcgaggccctgatgcgtgcc
taccggccggattgggtttacgagccacgcgagcggcactcgcagctgggcaaggggcga
gtccgcgagcagtgggggtggcgactatggcaaccgcgcgcgtcgcgcatcgaggaggcc
atccacgccgatctggcgttgctcttgtcgacctccggcacgacgggttcgccgcgcatg
gtgcgcctgtcgcagacgaacctggcttccaacgcggcggccatcgtcgcggcgctgggc
atcgacgccgaggatcgggcgctggctgccctgccgatgcattatgcctacgggctgtcc
gtgctcaacagtcacctgcacgccggggccgcgttggtggtcaccgaggagagccccgtc
gaagcgggattctggcagaccgtcgccgggcggcaggttacgactctccccggtgtcccg
atgacctatcagatgctgatgcgactgaatcccgggccgcgagcgctggcgagcgtgcgg
tcactcacggttgcgggcggccccttggccgagcatctggtggagcgcatggccgattgg
tgcgatgcctcgggcgcgcgcttccacgtgatgtacggtcagaccgaggcgacagcgcgg
atgagcgtcctgccgcccgggatgctgaggtccaagcccggctctgtcgggctggccatc
ggcgcaggccggctgagcctttcacccggcggcgagctgttgttcgcggggccgaacgtc
atgatgggatatgccctggcgcgcgaggatctggcgcttggggattgcatgggcggacgc
ctggcaacgggcgatctgggccggatcgacgatgacggctgtgcctatgtcagcggtcgg
ctgaagcgaatgctcaagatccacgggcaccgcgtgagtctggatgtgctggagcagggt
ctggagaccctgttgagactcccggtcgccgtcgcgggcgaggatgaccggctcgtggtg
tatctcgaagccggttcggcgaaagctgtcggcagtgcccgcgacgcactcacgcggcgc
taccgactgcctccatcagcgttcgaggtgcaggtgctgagcgagctcccgagaacgatc
aacggcaagctcgacgccgcggcattgcgggcacttgacagcggcacggcagaagagcgc
agacgtggctag
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