Thiocapsa sp. M50B4: KFB96_09650
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Entry
KFB96_09650 CDS
T07253
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
thim
Thiocapsa sp. M50B4
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thim03032
]
KFB96_09650 (gyrA)
03400 DNA repair and recombination proteins [BR:
thim03400
]
KFB96_09650 (gyrA)
Enzymes [BR:
thim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KFB96_09650 (gyrA)
DNA replication proteins [BR:
thim03032
]
Prokaryotic type
DNA Topoisomerases
KFB96_09650 (gyrA)
DNA repair and recombination proteins [BR:
thim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KFB96_09650 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Intein_splicing
Hint
Motif
Other DBs
NCBI-ProteinID:
QVL50644
LinkDB
All DBs
Position
complement(2134343..2138551)
Genome browser
AA seq
1402 aa
AA seq
DB search
MADFAREVIPINLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMSEQGNAWN
RAYRKSARVVGDVMGKYHPHGDSAIYDTMVRMAQRFSMRYLLVDGQGNFGCFTGDTRIKL
ADGTERTFAELAQRPSDEIFYVYAVDETGKIVIAEGRHARMTRPNAELLELTLDTGDVVR
CTPDHRFMLRDGSYKEARDLTPDDSLMPGVFDTAPVKPGLNDYLRILQPNLGRYQFVHHL
ADEFNVERGRCDAKGPFVRHHRNFNRWDNTPTNIQRLTFLDHLHLHAEQIGELWQDPEFR
EAQKRGVQNYYSEHPEALDTRRERFIRQNQDDDFRAVNGARTATELRRFYAKNSDARRAI
SERMHALWQDADYREKMSKALTGIEKRPLSDDEKARISAIISEKSKLMWGDDDKREQIVD
AICRALSAEDVRRKISDAVKRQWLNPEYRAKFPAEHFALMAQTLWQKPETRDFHREKIAK
QWEDDKFVRAQRQAVIASNARRLREDPDLMQDINRKAEESLHVSWSKPEYRQKVMQRKIA
GYVYDLTRRFPDCDITPELYESNRYRNWIPRLNKAVEYFGDFDALVTAGRHYNHRVVSTR
RLTVRADTYDITVDHHHNFLLACGVFVHNSVDGDPPAAMRYTEVRMTRIADALLDDLDKD
TVDFIPNYDNTEHEPVVLPARFPNLLVNGSSGIAVGMATNIPPHNLREVIDACLALIDNP
AMTIEELMVLVPGPDFPTAALINGVRGIREGYRTGRGRVVIRARTMVEVQKRSGREAIVV
TELPYQVNKARLLERIAELVKEKKIEGIAPDGLRDESDKDGMRVVIELKRDAYAEVLLAN
LYQHTQMQQVFGINMVALVDGQPRTLNLKQILEYFIRHRRDVVTRRTLFELRKARDRAHV
LEGYAIALANIDEIIALIKASANPAEARERLMERTWTPGSVTGMLERAGAEHTRPEELEA
AFGLTDAGYRLSERQTKAILDLQLQRLTGLEQDKILDEFKEILDKIAALLMILSDSDRLM
DVIREELTAIRDQFGDERRTEIQVDHTDLTLEDMIAPEEVVVTMSHQGYVKAQPISDYQA
QRRGGKGKSATSFKEEDFIDRIFVANSRDTVLCFSSRGRVYWLKVYELPQAGRGARGRPM
VNLLPLEPGERINAVLPVRDYESGYFVFMATSAGTVKKTPLDEFSRPLSRGIIAIDLHED
EVLIGVAITDGKQDLMLFTSAGKAVRFSEGAVRAMGRTAHGVRGVQLKPGQKVISLLVAE
PGTVLSVTENGYGKRTRVEDFPTKGRGTKGVIGISTSERNGAQVGAVLVRPDDEIMLITE
GGTLIRTPIDQIPVVGRSAQGVKLINLGEGERLVYLERIVALEGEKEGNGDLAEDRDPDE
PTGEPIDDDQSPEADPDSDPEA
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttcgcgagagaagttatacccatcaatctcgaggacgagatgcgtcagtct
tacctcgattacgccatgagcgtgatcgtaggacgcgcgcttcccgatgttcgcgacgga
ctcaagccggtccatcggcgcgtcctcttctcgatgagcgagcagggcaacgcctggaac
cgtgcctatcgtaaatccgcccgcgtggtcggcgacgtcatgggtaagtaccaccctcac
ggcgactcggccatctacgacaccatggtccgcatggcgcagcgcttctcgatgcgctac
ttgctggtggacgggcagggtaattttggctgtttcaccggcgatacccggatcaagcta
gctgacggcaccgaaagaacgtttgcggagttggcgcagcgaccgtccgacgagatcttt
tacgtctacgcggtggacgagaccggtaagatcgtgatcgccgaggggcgccacgcgcgg
atgacccgccccaacgccgagctgctggagctcaccctggacaccggcgatgtcgtccgc
tgtacgcccgatcatcgcttcatgctgcgtgatggttcctacaaggaagctcgggacttg
acgccggacgatagcctcatgccgggggtcttcgacaccgcgccggtcaagcctggactg
aatgactatctacgcatcctccagccgaatctcggacgctatcaattcgttcatcacctg
gccgacgagtttaatgtcgagcgaggtcgatgtgatgcaaagggtccctttgttcgtcat
caccgaaatttcaaccgctgggacaataccccgaccaatattcagcgtttgacattcctc
gaccatttgcacctgcatgccgagcagatcggtgagctgtggcaagatcctgaattccgc
gaggcgcagaaacgcggcgtacagaactactattccgagcatcccgaggctctcgacaca
cgacgcgagcgtttcattcgtcaaaaccaggatgatgacttcagggcggtgaatggcgct
cgaaccgctacggagttgcgtcgtttctatgcgaagaattcggatgcgcggcgcgcgatc
tccgagcgcatgcatgcattatggcaggatgccgattatcgcgaaaagatgtccaaagcg
ctgactggcatcgaaaagcgtcctctttccgatgatgagaaggcgaggatcagtgccatc
atctcggagaaaagcaagctcatgtggggtgatgacgacaagcgggagcaaatcgtcgac
gcgatttgtcgcgcactgtcggccgaggatgttcgtaggaagatcagcgatgccgttaag
cgacagtggcttaaccccgaataccgagcgaagtttccggcggaacattttgcgctcatg
gcgcaaaccttgtggcaaaagcccgagactcgcgatttccaccgtgaaaaaatcgccaag
caatgggaggatgataagttcgtccgggctcagagacaggccgtcatcgccagtaatgca
aggcgtctccgcgaggatcctgatttgatgcaggatatcaaccgcaaggcggaggaatcg
ctgcacgttagctggagcaagcccgagtatcggcagaaggtgatgcagcgcaagatcgca
ggctatgtctacgatctgacgagacgattccctgattgtgacatcacacctgaattatat
gagtcgaatcgttaccggaactggattccgcgactgaataaggctgtcgagtattttggc
gacttcgatgcgctcgtcacggcaggaaggcattacaaccatcgcgtcgtcagcacgcgt
cgactcaccgtgcgggcggatacctacgacatcacggtcgatcaccatcataattttcta
ctcgcgtgcggcgtcttcgttcacaactccgtagacggcgatccgccggcggccatgcgc
tacaccgaggtgcggatgacccgcatcgccgatgcgctgctcgacgacctcgacaaggac
acggtcgacttcatccccaactacgacaacaccgagcacgagccggtcgtcctcccggcg
cgcttcccgaatctgctggtcaacggctcctcgggcatcgcggtcggcatggccaccaac
atcccgccgcacaacctgcgcgaggtcatcgacgcctgtctggcgctcatcgacaacccg
gcgatgacgatcgaagagctgatggtgctggtgcccggcccggatttcccgaccgcggcg
ctcatcaacggcgtgcgcgggatccgtgagggctatcggaccggacgcggccgtgtggtc
atccgtgcccgcaccatggtcgaggtccagaagcgtagcgggcgcgaggcgatcgtcgtc
accgagctgccttaccaggtcaacaaggcacggctgctcgagcgcatcgccgagctggtg
aaggaaaaaaagatcgaaggaatcgccccggacgggttgcgcgacgagtccgacaaggac
gggatgcgtgtcgtcatcgagctcaagcgcgacgcctatgccgaggtgctgctggccaac
ctctaccagcacacccagatgcagcaggtcttcggcatcaacatggtcgccttggtcgac
ggccagccgcgcacgctcaacctcaagcagatcctcgaatacttcatccgtcatcgccgc
gatgtggtgacacgccgcaccctcttcgagctgcgcaaggcccgcgaccgggcgcatgtc
ctggaaggctatgcgattgcgctggcgaacatcgacgagatcattgccctgatcaaggcg
tcggccaatccggccgaggcacgcgagcgtttgatggagcgcacctggacgcccggctcg
gtcaccggcatgctcgagcgcgcgggcgccgagcacacccgtcccgaggagctcgaagcc
gccttcggtctgaccgacgccggctatcggctgagcgagcgccagaccaaggcgatcctg
gacctgcagctccagcgcctgaccggtctggagcaggataagatcctcgacgagttcaag
gagatcctcgacaagatcgccgccctgctgatgatcctctccgactcggatcgtctgatg
gacgtcatccgcgaagagctcaccgcgatccgcgatcagttcggcgacgagcgccgcacc
gagatccaggtcgaccacaccgacctcaccctggaggacatgatcgcgcccgaagaggtc
gtggtgaccatgtcgcatcagggctatgtgaaggcccagccgatcagcgactatcaggcg
cagcggcgcggcggcaagggcaagagcgcgacttcattcaaggaagaagacttcatcgac
cgcatcttcgtcgccaactcgcgcgacaccgtgctctgcttctccagccgcggccgggtc
tactggctcaaggtctacgagctgccgcaggccggtcgcggtgcgcgcggtcggccgatg
gtcaacctcctgccgctggaaccgggcgagcgcatcaacgccgtgctgccggtgcgcgac
tacgagtccggttatttcgtcttcatggcgaccagcgcaggcacggtcaagaagaccccg
ctcgacgagttctcgcggcccctctcgcgcggcatcatcgcgatcgacctgcacgaggac
gaggtcctgatcggcgtggccattaccgacggcaagcaggacctcatgctcttcacctcc
gccggcaaggcagtgcgtttcagcgagggggctgtgcgcgcgatgggccggacagcgcat
ggtgtacggggcgtccagcttaagcccggccaaaaggtgatttcgctcctagtcgccgag
cccggcaccgtgctgagcgtgaccgaaaacggttacggcaagcgcacccgcgtcgaagac
ttcccgaccaagggtcgcggcaccaagggcgtgatcggcatcagcacctccgagcgcaac
ggcgcccaggtcggggccgtgctggtgcgccccgacgacgagatcatgctcatcaccgag
ggaggcaccctgatccgcaccccgatcgatcagatcccggtcgtgggtcgcagcgcccaa
ggcgtgaagctgatcaatctcggcgagggcgagcggcttgtgtatctggagcggatcgtt
gcgctggagggcgagaaggagggcaacggggacctcgccgaggaccgagatccggacgag
ccaaccggcgagccgatcgatgatgatcagtctcccgaggccgatcccgacagcgatccg
gaggcataa
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