Thiocapsa sp. M50B4: KFB96_11125
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Entry
KFB96_11125 CDS
T07253
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
thim
Thiocapsa sp. M50B4
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thim03400
]
KFB96_11125 (vsr)
DNA repair and recombination proteins [BR:
thim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KFB96_11125 (vsr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QVL50900
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Position
complement(2440934..2441530)
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AA seq
198 aa
AA seq
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MTDRLTPAQRSRLMARVVGKDTKPEWILRSALHRLGFRYRLGGGGLPGRPDLILPKYRAV
VFVHGCFWHHHADCKRATLPRTNASFWKEKLERNVARDAEAIAALEAAGWGVVVVWECEL
YRDPVAAVSRVVAALTGELSCPRMAAAISGHSIPVGYCRSPKRSDVTGSAPSHSTRILIK
KGNARRFAFHRKIDWHPR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaggctcaccccggcccagcgctcgcgcctcatggcccgggtcgtcggcaag
gacaccaagcctgaatggatcctgcgctccgcgctgcatcggctcgggtttcgctatcgt
ctgggcgggggcggactgccgggccgtccggacctgatcctgcccaaatatcgcgccgtc
gtcttcgtacacggctgcttctggcatcaccatgccgattgcaaacgcgcaaccctgccg
cggaccaacgcctccttctggaaggagaaactcgaacgcaatgtcgcgcgcgacgccgag
gccatcgcggcgctcgaggccgcgggttggggggtcgtcgtggtctgggaatgcgagctg
taccgcgatccggtcgccgctgtgtctcgcgtggttgcggcattgaccggggagctatcg
tgcccgaggatggcggctgcgatatcggggcactcgatccccgtcggttactgcaggtcg
ccgaagagaagcgacgttaccggatcggccccaagccactcgacgaggatcctgatcaag
aagggtaacgcgcgtcggttcgcatttcaccggaaaattgactggcatccgcgctga
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