Thiocapsa sp. M50B4: KFB96_11785
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Entry
KFB96_11785 CDS
T07253
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
thim
Thiocapsa sp. M50B4
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thim03032
]
KFB96_11785 (ihfB)
03036 Chromosome and associated proteins [BR:
thim03036
]
KFB96_11785 (ihfB)
03400 DNA repair and recombination proteins [BR:
thim03400
]
KFB96_11785 (ihfB)
DNA replication proteins [BR:
thim03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KFB96_11785 (ihfB)
Chromosome and associated proteins [BR:
thim03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KFB96_11785 (ihfB)
DNA repair and recombination proteins [BR:
thim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KFB96_11785 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
CATASP
Adeno_E1A
Motif
Other DBs
NCBI-ProteinID:
QVL51019
LinkDB
All DBs
Position
complement(2610523..2610867)
Genome browser
AA seq
114 aa
AA seq
DB search
MTKSELIDVLAAAQDHLPYKDVEEAVRKTLDRMSTALATGERIEIRGFGSFSLHYRPPRI
GRNPKTGDSVALAGKHVPHFKPGKELRDRVNQAFQDEQDRQEEEEHIPLVAASR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgagctgatcgacgttctggcggcggcgcaagaccaccttccctacaaa
gacgtggaggaggcggtacgcaagaccctcgatcgtatgagcaccgcgcttgccaccggc
gagcggatcgaaatccgaggtttcggaagcttttcgttgcactaccggccgccccggatc
gggcgtaacccgaagaccggcgactcggtcgccttggccgggaagcatgtcccccatttc
aagcccggcaaggagctccgggaccgcgtcaaccaagcgtttcaagacgagcaggacagg
caggaagaagaagagcatatcccgctcgtcgccgcctctcgctga
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