Thiocapsa sp. M50B4: KFB96_11995
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Entry
KFB96_11995 CDS
T07253
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim03030
DNA replication
thim03430
Mismatch repair
thim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFB96_11995
03430 Mismatch repair
KFB96_11995
03440 Homologous recombination
KFB96_11995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thim03032
]
KFB96_11995
03400 DNA repair and recombination proteins [BR:
thim03400
]
KFB96_11995
Enzymes [BR:
thim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFB96_11995
DNA replication proteins [BR:
thim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFB96_11995
DNA repair and recombination proteins [BR:
thim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFB96_11995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DUF6177
DUF4618
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QVL51056
LinkDB
All DBs
Position
2658458..2659135
Genome browser
AA seq
225 aa
AA seq
DB search
MSRLLDWRRRWQLRRTPPGPLRSYLEHPFPMAKTDYREVEYLAIDLETTGLDIANDLILS
VGYVGVRGASIDLSSARHRVVRIDRSIPEATAIIHQITDDESAEGSELADVLEELLETLA
GKVMIAHHARIERGFLSNACKRLWQRGLLMPVVDTQALAYRTFERRQTPFKASDLRLHAL
GDRYNLPRYSAHNALSDALASAELFLAQAAYRDNGQGLPLRDFLC
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgactgctcgattggcgccgccgctggcaactgcgccgaaccccgccggggccc
ttgcgctcctacctggagcatccgtttccgatggcgaaaacggactatcgagaggtggag
tatcttgccatcgatcttgaaacgaccgggctggacatcgccaacgacctgatcctgagc
gtcggctatgtcggggtccgaggcgcatccatcgacctgtcgagcgcacgccatcgggtt
gtgcggatcgatcggtccatccccgaggcgacggcgatcatccatcagatcacggacgac
gagtccgccgaaggcagcgagcttgccgacgtcctcgaggagctcctcgaaaccctggca
ggcaaggtgatgattgcccatcatgcacgcatcgagcgcggcttcctgagcaacgcctgc
aagcgactctggcagcgaggactcctgatgccggtcgtggatacccaagccttggcctat
cgaacgttcgagcgccgacagaccccgttcaaggcgtccgatctgcgcctgcatgcgctc
ggggatcgttacaacctgccccgttacagcgcgcacaatgcgctgagcgacgcactggcc
tcggccgagctcttcctcgcccaggccgcctatcgagacaacggccagggactgcctctg
cgggatttcctgtgctga
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