Thiocapsa sp. M50B4: KFB96_14530
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Entry
KFB96_14530 CDS
T07253
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
thim
Thiocapsa sp. M50B4
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thim01002
]
KFB96_14530
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thim01011
]
KFB96_14530
Peptidases and inhibitors [BR:
thim01002
]
Cysteine peptidases
Family C82
KFB96_14530
Peptidoglycan biosynthesis and degradation proteins [BR:
thim01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KFB96_14530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Motif
Other DBs
NCBI-ProteinID:
QVL46958
LinkDB
All DBs
Position
complement(3200544..3201509)
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AA seq
321 aa
AA seq
DB search
MSDFDLGRRKGAWIATAVCASVLGVGVIDGAGAETFRIENPNDSVVGVPFYFNARAQDTL
LDIARHNGLGFDDMRQANPKVDIWMPGEGTPVMVPAFYVLPDAPRTGIVVNRAEKRLYYF
PPNDPNEVRIYAITVGKDAMSTPLGSFKVIEKREKPTWTPGPMTRANHAARGHILPPTVP
PGPDNPLGEYAMRLSNPDYLIHGTSQPWGLGMEVSGGCIRMYPEGIEELYGLTDITTPVN
IIDQPYKVGWRGDELYLEVQTGEKSVRRSAREVIPQWVKDTEGVKIDWEAVERAVKEDTG
IPQLVGSRRSPSEGSYLPMIF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttgatcttggccgacgcaaaggcgcgtggatcgccaccgcggtctgcgca
tccgtgttgggcgtcggggtcatcgacggggccggcgccgagactttccgcatcgagaac
ccgaacgattcggtggtgggggttcccttctacttcaatgcgcgtgcccaggataccttg
ctggatatcgcgcgccacaatggactggggttcgacgacatgcgtcaagccaaccccaag
gtggatatctggatgcccggcgagggtacgcccgtgatggttccggccttttacgtgctt
ccggatgcaccacggaccggcatcgtggtcaatcgcgccgaaaagcggctctactacttc
ccgccgaatgaccccaacgaggtgcgcatttatgccatcaccgtgggcaaggacgcgatg
agcacgccgctgggcagctttaaggtgatcgaaaagcgcgagaagccgacctggacaccc
ggcccgatgacgcgcgcgaaccatgccgcccgcggccacatcctgccgccgacggtaccg
ccgggccccgacaatccgctgggcgagtatgccatgcggctgagcaatccggattacctg
atccacgggaccagccaaccctggggcctcgggatggaagtcagcggcggatgcatccgc
atgtaccccgagggtatcgaggaattatatggtttgaccgacatcacgacgccggtgaac
atcatcgaccaaccctacaaggtcgggtggcgtggcgacgagctttacctggaggttcaa
accggcgagaagagcgtgcgacggagcgcgagagaggtcatccctcaatgggtgaaggac
accgaaggtgtgaaaatcgactgggaggcggtcgagcgtgcggttaaagaagacaccggc
atcccacaactcgtgggaagccggcgcagtccctcggaagggtcttacttgcccatgatc
ttctga
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