Thiocapsa sp. M50B4: KFB96_14645
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Entry
KFB96_14645 CDS
T07253
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim00300
Lysine biosynthesis
thim00470
D-Amino acid metabolism
thim01100
Metabolic pathways
thim01110
Biosynthesis of secondary metabolites
thim01120
Microbial metabolism in diverse environments
thim01230
Biosynthesis of amino acids
Module
thim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KFB96_14645 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KFB96_14645 (lysA)
Enzymes [BR:
thim01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KFB96_14645 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QVL46979
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Position
3225445..3226695
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AA seq
416 aa
AA seq
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MDHFNYRDDVLYAEDVPLADIAARFGTPCYVYSRATLERHWRAFDRAFRDHPHLVCFAVK
ANSNLAVLNVLARLGSGFDIVSLGELERVLAAGGDPAKVIFSGVGKREDEIRFALEVGIR
CFNVESESELVRLDRIAGEMGMIAPVSLRVNPDVDAQTHPYIATGLKENKFGIDIHAAEE
VYVRAAALPNLRVTGIDCHIGSQLTDLAPFIDALGRVLTLAERLGEIGIPIAHLDIGGGL
GIRYTEEHPPEPAAYAAAMSYLLGDRPYEIMLEPGRAIAGNAGVLLTRVEYLKHNGQRRF
AILDAAMNDLVRPALYQAVQDIVPVMYNTDAEPARYDLVGPVCETGDFLGKGRQLALSEG
DLLAVRGSGAYGFTMSSNYNSRPRVPEVMVDGDQVHLVRERETVASLFAGESVLPS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcacttcaactatcgcgacgatgtcctctacgccgaggatgtcccgctcgccgac
atcgccgcgcgtttcggtacgccctgttatgtctattcccgtgcgacgctggaacgccat
tggcgcgccttcgaccgcgccttccgcgaccatccgcatctggtctgctttgccgtcaag
gccaactccaatctggcggtgctcaatgtcttggcgcgcctgggctcgggtttcgacatc
gtctcgctcggcgagctcgagcgcgtgctcgccgccgggggcgacccggccaaggtcatc
ttctccggggtcggcaagcgcgaggacgagatccgctttgccttggaggtcgggattcgc
tgcttcaacgtcgagtccgagtccgagctggtccggctcgatcggatcgccggcgagatg
ggtatgatcgcgccagtatcgctgcgtgtgaatcccgacgtcgatgcccagacccatccc
tatatcgctaccggcctgaaggagaacaagttcgggatcgatattcacgcggccgaggag
gtctatgtccgggccgcagcgctgccgaacctgcgcgtgaccggcatcgactgtcatatc
ggctcccagctcacggatctggcccccttcatcgacgcgctcgggcgcgtgctgaccctg
gccgagcgtctcggcgagatcggcatcccgatcgcgcatctggacatcggcggcggactc
ggcatccgctacaccgaagagcatcccccggagcccgccgcctatgccgcggccatgagc
tacctgctcggcgatcgtccctacgagatcatgctggagcccggccgcgccatcgccggc
aatgccggcgtcctgctgacccgcgtggaatatctcaagcacaacggccagcgccgcttc
gcgatcctggacgcggccatgaacgacctggtgcgccccgcgctctatcaggccgttcag
gacatcgtgccggtgatgtacaacacggacgccgagcccgcccgctatgacctggtcggc
ccggtctgcgagaccggcgacttcctcggcaagggccgccagctcgccttgagcgagggc
gacctgctcgccgtgcgcggatcgggcgcctacggcttcaccatgagctccaactacaac
agccgcccgcgcgtgcccgaggtcatggtcgacggcgatcaagtgcatctcgtgcgcgag
cgcgagaccgtcgcgagcctcttcgccggggagtccgttctaccgtcatga
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