Thiocapsa sp. M50B4: KFB96_14855
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Entry
KFB96_14855 CDS
T07253
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KFB96_14855 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thim03400
]
KFB96_14855 (uvrB)
DNA repair and recombination proteins [BR:
thim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KFB96_14855 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KFB96_14855 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_22
AAA_30
AAA_16
eIF3_p135
DUF4253
Motif
Other DBs
NCBI-ProteinID:
QVL47014
LinkDB
All DBs
Position
3273539..3275548
Genome browser
AA seq
669 aa
AA seq
DB search
MSERPFHLVSPFAPAGDQPEAIRRLAEGLNDGESAMTLLGVTGSGKTFTIASVIDRVQRP
ALILAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPSTDTYIEKDSSINEHI
EQMRLSATKALLERPDVIIVASVSSIYGLGDPDAYLKMVLHLNRGDLIDQRALLRRLADL
QYRRNEIELSRGTYRVRGDVIDIYPAESDDEALRVELFDEEIESLSLFDPLTGEQLRKVP
RYTVFPKTHYATPRQTILNAVEQIKVELKDRLTWLRDNDKLVEAQRLEQRTLFDLEMMLE
VGYCSGVENYSRYLSGRGPGEPPPTLYDYLPADAIVVIDESHVTVPQLGAMYKGDRSRKE
NLVDYGFRLPSALDNRPMRFEEFQARQPQTIYVSATPRAYEIRHSGAVVEQVVRPTGLVD
PEVEVRPALTQVDDLLSEIGLRVAVGERVLVTTLTKRMAEDLTEYLNEHGVKVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSEGSLIQTIG
RAARNANGKAILYADRITGSMERAIGETERRRAKQILHNTAEGITPQTIRKAVADILEGA
IPGAPMKARQYAKVAEEIIEYAKLTPQQMAKKLKALEKTMYQHAKNLEFEQAAAVRDKIK
ELQGRGLAA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgcccctttcatttagtttcgccgttcgcccccgcaggcgaccagcccgag
gcgatccgccgcctagcggagggtctgaacgacggcgagtcggcgatgaccctgctcggc
gtcacgggctcgggcaaaaccttcaccatcgccagcgtcatcgaccgagtgcagcgcccg
gccttgatcctggcgccgaacaagacgctcgcggcccagctctacggcgagatgaaggag
ttcttcccgcacaacgcggtggagtatttcgtctcctattacgactactaccagcccgag
gcgtacgtcccttcgaccgacacctatatcgagaaggactcctcgatcaacgagcacatc
gagcagatgcgtctctcggcgaccaaggcgctgttggagcgtcccgatgtcatcatcgtg
gcgagcgtctcctccatctacggcttgggcgacccggacgcctatctgaagatggtgctg
catctgaaccgcggcgatctgatcgatcaacgcgccctgctgcgccggctcgccgacctg
caataccgccgcaacgagatcgagctttctcgaggcacctaccgggtgcgcggcgacgtg
atcgacatctatccggccgagtcggacgacgaggcgctgcgggtggagctattcgacgag
gagatcgagtcactctccctcttcgacccgctgaccggtgaacagctgcgcaaggtcccg
cgctatacggtctttccgaagacgcactacgccacgccgcgccagaccatcctgaatgcg
gtggagcagatcaaggtcgagctgaaggaccgcctgacctggctgcgggacaacgacaag
ctggtcgaggcccagcgcctggagcagcgcaccctgttcgacctggagatgatgctggag
gtcggctactgctccggggtcgagaactacagccgctatctctccggacgcggacccggc
gagccgccgccgaccctgtatgactatctccccgcggatgccatcgtcgtcatcgacgag
agccatgtcaccgtgccccagctcggcgccatgtacaaaggtgaccgctcacgcaaggag
aatctcgtcgactacggcttccggctgccctcggcgctcgacaaccgcccgatgcgcttc
gaggagttccaggcccgccagccccagaccatctatgtctcggccaccccgcgcgcctac
gagatccggcactcgggcgccgtcgtcgagcaggtggtccgacccaccggtctggtggat
ccggaggtcgaggtccgccctgccctgacccaggtcgacgatctgctctcggagatcggg
ctgcgggtcgccgtcggcgagcgtgtgctggtcaccacactcaccaagcgcatggccgag
gacctgaccgagtatctcaacgagcacggcgtgaaggtccgctatctgcactcggacatc
gacacggtcgagcgcgtcgagatcatccgggatctgcgcttgggcgagttcgacgtgctg
gtcgggatcaatctgctgcgcgaggggctcgacatgccggaggtctcgctggtcgccatc
ctggacgccgacaaggagggtttcctgcgctcggaaggctccttgatccagacgatcggg
cgggccgcgcgcaacgccaacggcaaggcgatcctctatgccgaccgcatcaccggctcc
atggagcgcgcgatcggcgagaccgagcggcgacgcgccaagcagatcctccacaacacc
gccgagggcatcacgcctcagacgatccgcaaggcggtcgccgacatcctcgagggcgct
atcccgggcgcacccatgaaggcgcgccagtatgccaaggtcgccgaggagatcatcgaa
tacgccaagctgacgccgcagcagatggccaagaagctcaaggcgctggagaagaccatg
taccagcatgcgaagaacctcgagttcgagcaggccgccgccgtccgggataagatcaag
gagttgcaggggcgcgggcttgcggcctaa
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