Thiocapsa sp. M50B4: KFB96_16425
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Entry
KFB96_16425 CDS
T07253
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim00061
Fatty acid biosynthesis
thim00071
Fatty acid degradation
thim01100
Metabolic pathways
thim01212
Fatty acid metabolism
thim02024
Quorum sensing
thim04146
Peroxisome
Module
thim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KFB96_16425
00071 Fatty acid degradation
KFB96_16425
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KFB96_16425
09145 Cellular community - prokaryotes
02024 Quorum sensing
KFB96_16425
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
thim01004
]
KFB96_16425
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thim04147
]
KFB96_16425
Enzymes [BR:
thim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KFB96_16425
Lipid biosynthesis proteins [BR:
thim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KFB96_16425
Exosome [BR:
thim04147
]
Exosomal proteins
Exosomal proteins of breast milk
KFB96_16425
Exosomal proteins of breast cancer cells
KFB96_16425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
XdhC_CoxI
Motif
Other DBs
NCBI-ProteinID:
QVL47293
LinkDB
All DBs
Position
3610190..3612007
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AA seq
605 aa
AA seq
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MSRWSEDLIPIERAKTLDGLFVQRVKRSPTRVAYRHCERDGGWAELTWAETRERVARWHR
ALAAEALESGDRVALLLRNCPDWVVFDQAALSLGLVTVPLYTDDRAENAAYILQDAAVKL
LLIHDAGRWKRLADSLGDAPFPTRVVILESSPAAHEIAAEDPRVVIAEDWLPQTAPELVQ
RDGDPDALATIVYTSGTTGRPKGVMLSHRNILGNAHGALTVIDCYQEDRFLSFLPLSHML
ERTGGYYLPMMAGATVAFARSVAQLAEDMQSIRPTVIIAVPRVFERVHQRIQDQLEARPA
PARWLFRLAVAAGWRTFLREQGRGGWHPLMLLWPLLRRKVGDQVLAKLGGALRVAVSGGA
PLPAPVAHTFIGLGLPLLQGYGLTETSPVISFNPLKDNIPESVGVPLRGLQLRIGAQKEL
LVKGENVMLGYWNNHAATARVLTQDGWLHTGDQVRLEHGHIYITGRLKDILVLSNGEKVP
PADLEMAIAMDPLFEQVVVLGEGHSYLTALLVLNADLWPGLAREQGLDPERPESLRDPRI
NKLILQRIRSALHDFPGYAKIRRVTLTLEPWSIDNGLLTPTMKVKRAMVVTRYRDEIEGM
YGMDS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgatggtccgaggacctgatcccgatcgagcgcgccaagaccctggacgggctc
ttcgttcaacgcgtcaagcgctcgccgacgcgggttgcctatcgccattgcgagcgcgat
ggcgggtgggccgagctgacctgggccgagacgcgcgagcgggtggcacgctggcatcgg
gcgctcgcggccgaggcgctcgaaagcggggaccgggtcgccctcctgctgcgcaactgc
cccgattgggtggtgttcgatcaggctgcgctgtcgctcgggctggtcacggtgcccctc
tacacggacgaccgggccgagaacgcggcctatatcctgcaggacgcggcagtcaagctg
ttgctgatccacgatgccgggcgttggaagcggttggccgacagtctcggcgatgcgccc
tttccgacgcgcgtcgtgatcctggaatcgagtcccgcggcacacgagattgcggccgag
gacccccgagtggtgatcgccgaggattggctgccgcagacggcgccggagcttgtgcaa
cgtgacggcgatccggatgccttggcgaccatcgtctacacctccggcaccaccgggcgc
cccaagggtgtcatgctcagccaccgcaacatcctgggcaacgcccacggcgcattgacc
gtgatcgattgctaccaggaggatcggtttctctcctttctgccgctgtctcatatgctc
gaacgcacgggcggctattacctgccgatgatggccggggcgacggttgccttcgcacga
tccgtggcgcagctcgccgaggacatgcagagcattcgtcccaccgtcatcatcgccgtc
ccgcgggtcttcgagcgggtccaccagcgcatccaggaccaactcgaggcacgcccggcg
cccgcgcgctggctattccggctcgccgtcgccgcggggtggcggacctttctgcgtgag
caagggcgcggcggctggcaccctttgatgctgctctggccgttgctgcgccgcaaggtc
ggcgatcaagtcctcgccaagctcggtggagcgctgcgtgtcgccgtgagtggcggtgcg
cccctgccggcccccgtcgcgcacaccttcatcggtttgggactgcccctgctgcagggc
tacggtttgaccgagaccagtcccgtcatcagcttcaatccgctcaaggacaatatcccg
gaaagcgtgggtgtgccgctgcgcgggctccagttgcgcatcggggcgcagaaggagctg
ctcgtgaagggcgagaacgtgatgctcggctactggaacaaccacgcggccaccgcccgg
gtcctgacacaggatggttggctgcacaccggcgatcaggtgcgtctggagcacggacac
atctacatcaccggacgtctcaaggacattctggtcttgtccaacggcgagaaggtcccg
cccgcagacctcgagatggcgatcgcgatggaccctttgttcgagcaggtggttgtactc
ggcgagggacactcctatctcacggccttgctggtgttgaacgcggacctctggcccgga
ctggcgcgggagcagggtctggatcccgagcgcccggaaagcctgcgcgatcctcggatc
aacaagctgatcctccagcggattcgttcggcgctgcacgattttccggggtatgccaag
atccggcgcgtgaccctgacgctcgagccctggtccatcgacaacggtttgctgacgccg
accatgaaggtcaagcgcgccatggtcgtcacgcgctatcgcgacgagatcgaggggatg
tacgggatggattcctga
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