Thiocapsa sp. M50B4: KFB96_16465
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Entry
KFB96_16465 CDS
T07253
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim00550
Peptidoglycan biosynthesis
thim01100
Metabolic pathways
thim01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KFB96_16465 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KFB96_16465 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thim01011
]
KFB96_16465 (mrdA)
Enzymes [BR:
thim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KFB96_16465 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
thim01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KFB96_16465 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QVL47299
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All DBs
Position
3617010..3618875
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AA seq
621 aa
AA seq
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MLEANLEDRKREARLVSTRALIAGLLAIVALSLVVVRLVHLQVDQHDHFTVLSRDNRVKV
QPLPPARGLIYDAKGVLLADNHPSFSLEITIEKVGDLEATIEGLSRLIRIEPQDRNRFER
QKRQRMRFQGVPIRLNLTQAEVAQFAVDGHRFPGVDIRAELVRTYPLGEHTAHVLGYVGR
INEQELARIDKSNYAGSQFIGKGGLEKAHEALLHGQVGYQQVEVNARGRVIRTLESRPPV
SGQDLHLYLDIGLQQAAKEALGEERGAVVAIDPRNGGVLALVSNPSFDPNLFVEGISQTD
YQALLSSPDKPLFNRAVRGQYPPGSTIKQFVALAGLASGVTTSRRATYCSGAFSLPGHSH
RFRCWRRGGHGAMNLEQALVQSCDVYFYDLANRMGIDRLSGFLSDFGFGALTGIDVAGEL
GGLMPTREWKQRVRKQAWYPGETLIVGIGQGSFLATPLQLAVATAAVANHGKVIRPQVAR
AAQAPGAPAAEQLPMLSHTIELGEKQQWDQIVNAMAKVVESGTARRIRSTEYRIAGKTGT
SQVFSLAQNQRYNAATLPKHLHDHALFVAFAPIEDPRIAIAVIVENGGGGGATAAPVARR
IMDAYLGGATVLTDVGGEGGD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagcgaatctggaagaccgcaaacgcgaggcccgcctggtctcgaccagagcg
ctgatcgccgggctgctggcgatcgtcgccctctcgctggtcgtggtgcggttggtgcac
cttcaagtcgatcaacacgaccatttcaccgtcctgtcccgcgacaatcgggtcaaggtc
cagcctttgccgccggcacgcggactcatctacgacgccaagggcgtgctgctcgccgac
aaccacccgtcgttctccttggagatcacgatcgagaaggtcggcgacctcgaggccacg
atcgagggactctcccggttgatccggatcgagccgcaggatcgcaaccgcttcgagcgt
cagaagcgacaacgcatgcgcttccagggcgtaccgatcaggctcaatctgacccaggcg
gaggtcgcgcagttcgcggtcgacgggcaccgctttcccggcgtggacatccgcgccgag
ttggtgcgcacctatccgctgggcgagcacacggcgcatgtgctcggctatgtcggccgg
atcaacgagcaggagctcgcccgcatcgacaagagcaactatgccgggagccagttcatc
ggcaagggcggcttggagaaggctcacgaggcgctgctgcacggtcaggtcggctaccag
caggtggaggtcaacgcccgcggccgggtgatccggaccctcgagagccgcccgccggtc
tccggtcaggatctgcatctgtatctggacatcggcctgcagcaggcggcgaaagaggcg
ctcggcgaggagcgcggtgccgtggtcgccatcgatccacgcaacggcggcgtcttggcc
ctcgtgagcaacccgagcttcgaccccaatctgttcgtggaagggatcagtcaaacggac
tatcaggccctgctgagctcgccggacaagcccttgttcaaccgagcggtgcgcggacag
tatccgccggggtcgaccatcaagcagttcgtcgccctcgccggcctggcctcgggggtc
acgacctcgcgacgcgcgacctattgctcgggcgcattcagcctgcccggacactcccat
cggtttcgctgctggcgtcgcggcggtcatggcgccatgaacctcgagcaggcgctggtg
cagtcctgcgacgtctacttctacgatctcgccaaccggatggggatcgaccgactctcg
ggctttctctcggacttcggcttcggcgccttgaccgggatcgatgtcgccggcgagctg
ggcgggctcatgccgacgcgcgaatggaaacaacgggtccgcaagcaggcctggtatccg
ggcgagaccctgatcgtgggcatcgggcagggctccttcctggcgacaccgctgcaactg
gcggttgcaacggcagcggtcgccaatcacggcaaggtgattcgtccgcaggtggcgcgc
gcggcacaggctcccggtgcgcccgcagccgagcagctgccgatgctctcgcacaccatc
gagctcggcgagaaacagcaatgggaccagatcgtcaacgccatggccaaggtcgtggaa
tccggcaccgcccggcgcattcgcagcaccgagtaccgcatcgccggcaagaccgggacc
tcccaggtcttcagcctcgcccagaaccaacgctacaatgcggcgacgctccccaagcac
ctgcatgaccacgccttgttcgtcgccttcgcaccgatcgaggatccgcgtatcgccatc
gcggtcatcgtcgagaacggcggcgggggcggcgccaccgcggcacccgtcgcgcgtcgc
atcatggatgcctacctgggcggcgcgaccgtcctgaccgatgtcggaggcgagggtggc
gattag
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