Thiocapsa sp. M50B4: KFB96_17110
Help
Entry
KFB96_17110 CDS
T07253
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim00540
Lipopolysaccharide biosynthesis
thim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KFB96_17110
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
thim01005
]
KFB96_17110
Enzymes [BR:
thim01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
KFB96_17110
Lipopolysaccharide biosynthesis proteins [BR:
thim01005
]
Core region
KFB96_17110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
DUF4131
DUF2069
OppC_N
EptA_B_N
Motif
Other DBs
NCBI-ProteinID:
QVL47416
LinkDB
All DBs
Position
3762832..3764148
Genome browser
AA seq
438 aa
AA seq
DB search
MPSIVPTDGWSRAGLVGLYVFAFFGLLGITPATVGLVLLALAFLIRFDAWRRLARDPVAL
TALAFGLYVAVHSAIAYVLQPTPTLSQAVVENGTDWVKLLLFIPLAYWAAGRPDRVRLVL
LLGLAGFTLATFRKIDWATFDAVFFSTRFDAYLPSIAFGMFAGLGALGLLATRRAFWAMR
DRPWQRWLATTLWAVWLLVMLEGLLLSQSRGSWLGFLGGLAVLMLMEWRARQATTVRPAR
RRWFALLLVAAALGAFLSSQYQTIAMRLTDQTDTLQQVISGDVTEVTSDPVGLRVNALLF
TVEKWREHPWFGWGAGTSREWIASSGRADTLLDNVNWLPHLHNAYAETLFQFGAVGLLLA
VALVWALVRATGGECRAGRLPADLCRLFLVTLVFVLIWNLFNYRVVRSDWMVFWILLAGS
AYSFRLARLTKPPGDGRG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcatcgtgccgaccgacggttggtcacgtgcaggtctcgtcggcctttatgtc
tttgccttcttcgggctgctcgggatcacgccggccaccgtcggcctggtcctgctggcg
cttgctttcctgatccgattcgacgcttggcggcggctcgcacgggatccggtcgccctc
acggccctggccttcgggctctatgtcgccgtgcacagcgcaatcgcctatgtcctacag
ccgaccccgacgctgtcacaagcggttgtcgagaacggaacggattgggtgaagctgctg
ctcttcatcccgctcgcctactgggccgccggacgcccggatcgggtgcgcctggttctg
ctgctcgggctcgcgggcttcaccctcgcgacctttcgcaagatcgactgggcgaccttc
gacgccgtcttcttctcgacccggttcgatgcttaccttccgtcgatcgccttcggcatg
ttcgccgggctcggggcgctcgggctcctcgcgacacgccgtgccttctgggcgatgcgc
gaccgaccttggcagcgctggctcgcgacgacgctctgggccgtctggctgctcgtcatg
ctggagggcctgctcctgtcccaatcgcgcggctcctggctcggctttctcggcgggctg
gcggtcttgatgctgatggaatggcgggcgcgacaggcgacgacggtaagacccgcacgc
cgacgctggtttgcgctcctgctggtcgccgccgccctcggggccttcctgtcgagtcaa
tatcagacgatcgcgatgcggctcaccgaccagactgacaccctgcagcaggtgatcagc
ggcgatgtgaccgaggtgacctccgatccggtcggcctgcgcgtcaacgccctgctcttc
actgtcgagaaatggcgcgaacacccctggttcggctggggtgcgggcaccagccgcgaa
tggatcgcctccagcgggcgagcggacaccctcctggacaacgtcaattggctgccgcat
ctgcacaacgcctatgccgaaacgctgtttcaattcggcgccgtcgggctgctgctggcg
gtcgcgctggtctgggcgctggtgcgcgcgacgggcggcgaatgtcgcgccggacgactc
ccggcggatctctgccgactcttcctggtcacgctcgtgttcgtgctgatctggaatctg
ttcaactatcgcgtggtgcgcagcgactggatggtcttctggatcctgctcgcagggtcc
gcctacagcttccgtctcgccaggctgacgaagccgccgggggacggccgcgggtga
DBGET
integrated database retrieval system
