Thiocapsa sp. M50B4: KFB96_17175
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Entry
KFB96_17175 CDS
T07253
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KFB96_17175 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thim03000
]
KFB96_17175 (nifA)
Transcription factors [BR:
thim03000
]
Prokaryotic type
Helix-turn-helix
Other families
KFB96_17175 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA
GAF_3
AAA_2
Mg_chelatase
AAA_16
AAA_3
nSTAND3
HTH_23
Parvo_NS1
DUF3475
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QVL47428
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Position
3776069..3777649
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AA seq
526 aa
AA seq
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MNADSPVPGSAEQACRLDLLESQLGALFEVSSVLSRSLDLRQTLSEVLGVLHERGRLQHG
MVSLLSEDRGELLIRALHTDDPHATDRIAYQPGEGVIGSILSRNRPWIVPRIGDEPRFLD
RLSLYDPDLPFIGVPIRLGEGGAIGVFAAQPPVADGLLEERARFLEMVANLIGQAVRLAR
TVEAEQQALREERDKLRREVKGTHGFDSIIGHTDAMRLVFDQVRQVAKWNTTVLIRGESG
TGKELIANAIHYNSPRARAAFIKLNCAALPDNLLESELFGHEKGAFTGAISQRKGRFEQA
DGGTLFLDEIGEITPAFQAKLLRVLQEGEFERVGGGRTLKVDVRVIAATNRDLEAEVRAG
DFREDLYYRLNVMPIRMPALRERIEDIPDLARFLVDKVSRMQGRALSITDSALRILMRHD
WPGNVRELENCMERAAVMSEQGIIDRDVIELTGLNVAALASEPLPSTPAKTSTIDFNDPD
LDERERVIAALEEAGWVQAKAARLLNMTPRQIAYRIQTLNIRMRQF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgactctcccgtccccggcagcgccgagcaggcctgccggttggatctgctc
gaatctcaactgggcgcactcttcgaggtgagctcggtgctcagccgttcgctcgatctg
cgccagaccctgagcgaggtgctcggcgtcctgcacgagcgagggcgcctccaacacggg
atggtcagtctgctgagcgaggatcgcggcgagctcttgatccgcgcgctgcacaccgac
gacccccacgcgaccgaccgcatcgcctatcagcccggcgagggcgtgatcggcagcatc
ctctcccggaatcggccttggatcgtgccgcgcatcggcgacgagccgcgcttcctcgat
cgactcagtctctacgatccggacctgcccttcatcggtgtcccgatccgactcggcgaa
ggcggtgcaatcggcgtcttcgcggcgcagcctcccgtggccgacgggctgctcgaagag
cgtgcgcgctttctggagatggtcgccaatctgatcggccaagcggtccgtcttgcccgc
accgtcgaggccgagcagcaagccttgcgcgaggagcgcgacaagctccgacgcgaggtc
aaaggcacccacggcttcgacagcatcatcggacacacggacgccatgcgcctggtcttc
gatcaggtgcgccaagtcgcgaaatggaacacgaccgtcctgattcggggtgaatcaggc
accggcaaggagttgatcgccaacgccatccattacaactcgccgcgcgcccgcgccgcc
ttcatcaagctcaactgcgcggccctgccggacaatctgctggaatccgagctcttcggt
cacgagaagggcgccttcaccggcgccatcagccagcgcaagggccgtttcgagcaggcg
gacggcggcaccctctttctcgacgagatcggcgagatcacgcccgccttccaggccaag
ctgttgcgtgtattgcaggagggcgagttcgagcgggtcggcggcggtcgcacgctcaag
gtcgatgtgcgggtcatcgcggccaccaatcgcgacctcgaggccgaggtgcgcgccggc
gacttccgcgaggatctttactaccgcttgaacgtcatgcccatccgcatgcccgcgctg
cgcgagcgcatcgaggacatccccgacctcgcccgctttctcgtggacaaggtctcgcgc
atgcaggggcgcgcgctttcgatcaccgacagcgccctgcgcatcctgatgcggcatgac
tggcccggcaatgtccgcgagctcgagaactgcatggagcgcgccgcggtcatgagcgag
cagggaatcatcgaccgcgacgtcatcgagctgaccggcctgaacgtggccgcgctcgca
agcgagccgcttccgagcacgcccgcgaagacatccacgatcgatttcaacgaccccgac
ctcgacgagcgcgagcgcgtcatcgccgcattggaagaggccggctgggtccaggccaag
gccgcccgactgctcaacatgacaccgcgccagatcgcctaccggatccagacgctgaac
atcaggatgcggcaattttaa
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