Thiocapsa sp. M50B4: KFB96_23420
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Entry
KFB96_23420 CDS
T07253
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
thim
Thiocapsa sp. M50B4
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thim03021
]
KFB96_23420 (rpoS)
Transcription machinery [BR:
thim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KFB96_23420 (rpoS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
TetR_N
KORA
Motif
Other DBs
NCBI-ProteinID:
QVL48504
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Position
5137867..5138901
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AA seq
344 aa
AA seq
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MSSADAREPKVDGSDLASDLDGEILLEGEDSEPTDEDIDSNEADPVESEPIEPAAVEPAA
ERFSSGAGDFDATRLYLNEIGESKLLTAEEEVALSRAAQSGDNAARHRMIVCNLRLVVKI
ARRYLNRGLPLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTV
RLPIHVVKEINIYLKAARKLSQSLDHEPTTEDIAVLLGKPIGEVKRMLGLNERIASVDTP
YSKDADKPLVDMLQDEAADDPADRIQDTDIQANLEHWLGKLNAKQREVVERRFGLHGYEN
STLENVAQELGVTRERVRQIQMDALRRLRDILEKEGFSIDAFFK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcgccgacgctcgtgagcccaaggtcgatggttccgatctcgcttcggacctt
gacggcgagatcctgctcgaaggcgaggactccgagccgaccgacgaggatatcgactcc
aacgaggccgatccggtcgagtccgagccgatcgagccggcggcggtcgagcccgcggcc
gagcgcttcagctcgggcgcaggcgatttcgatgcgacccgtctctacctgaacgaaatc
ggcgagtcgaagcttctcacggcggaggaagaggtggcgctctcgcgcgccgctcagagt
ggcgacaacgccgcgcgccaccgcatgattgtctgcaacctccgattggtggtgaagatc
gcccggcgctatctcaatcgcggcctccctctgttggatctgatcgaagagggcaacctc
ggtttgatccgcgccgtggagaaattcgacccggagcggggatttcgtttctccacctat
gccacctggtggatccgccagacgatcgagcgggcgatcatgaaccagacgcggaccgtg
cgtctgccgattcatgtcgtgaaggagatcaacatctatctcaaggcggcgcgtaagctc
tcgcagagtctcgatcacgagccgaccaccgaggacatcgccgtcctactcggcaagccg
atcggcgaggtcaagcggatgctcgggttgaacgagcggattgcctcggtggatacgccc
tacagcaaggatgccgacaagccgctcgtcgacatgctccaggacgaggctgccgatgac
ccggccgaccgcatccaggacacggatattcaggccaatctcgagcactggctcggaaag
ctcaacgccaagcagcgcgaggtggtggagcgtcgcttcggtctgcacggttacgagaac
tcgaccctcgagaacgtcgcacaggagctgggcgttacccgagagcgcgtgcgtcaaatc
caaatggacgcgctgcggcggctgcgcgatatcctggaaaaagaagggttttcgatcgat
gcttttttcaagtaa
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