Thiocapsa sp. M50B4: KFB96_23545
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Entry
KFB96_23545 CDS
T07253
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
thim
Thiocapsa sp. M50B4
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thim03032
]
KFB96_23545
03036 Chromosome and associated proteins [BR:
thim03036
]
KFB96_23545
03400 DNA repair and recombination proteins [BR:
thim03400
]
KFB96_23545
DNA replication proteins [BR:
thim03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KFB96_23545
Chromosome and associated proteins [BR:
thim03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KFB96_23545
DNA repair and recombination proteins [BR:
thim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KFB96_23545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QVL48524
LinkDB
All DBs
Position
5166551..5166862
Genome browser
AA seq
103 aa
AA seq
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MNKSDEKSAAVKALNKSELIEKMADAADISKAAAGKALDAFTDAIGEALKVGKTVSLIGF
GTFAVKERAARTGRNPQTGAAIEIKASKTPSFKAGKALKDAVQ
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcggacgaaaagtcagccgcggtcaaggcactaaataagtcggagcttatc
gaaaagatggcggatgccgcggatatctcgaaagcagcggcggggaaggcactcgatgcc
ttcacggacgcgatcggcgaggcactgaaggtgggcaaaaccgtttccctaatcggcttc
ggaaccttcgcagtgaaggagcgcgccgcgcgcaccggtcgtaaccctcagacgggtgcg
gcaatcgagatcaaggcgtcgaagacgccttcatttaaggctggcaaagccctgaaggac
gcagtacaatag
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