Thiocapsa sp. M50B4: KFB96_23585
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Entry
KFB96_23585 CDS
T07253
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KFB96_23585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thim02000
]
KFB96_23585
Transporters [BR:
thim02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
KFB96_23585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
Mg_chelatase
AAA_25
AAA_16
NACHT
AAA_5
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QVL48530
LinkDB
All DBs
Position
5174895..5176931
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AA seq
678 aa
AA seq
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MSSDVLLEVSGLTTLLGDAARPVRVVDGIDLTIRRGETFVLLGESGCGKSMTALSLMRLL
PPSGRVAAGAVRLAGTDLLRLTEAEMRHVRGGRMAMIFQEPQTSLNPVMSVGDQIAEAVR
VHEGGSRDRTPARVVELMRAVGIPDPARRVDEYPHQLSGGMKQRIMIAMALAGDPQLLIA
DEPTTALDVTIQAQVLRLLKDLQAKTGMAVLLITHDLGVVAETADRLAVMYAGQILETAT
TDAFFAAPAHPYSRRLMESLPGADKRNGRLAVIPGRVPHLDQAFVGCRFAERCDAVMPRC
REQAPVWRDLVTGQGVRCHLWDQGGAQPVGLTRGVRDPVAAPETMLDGEGAPDPEAAVAP
MLQVRDLKVHFPIHDGVFRRVVGQVRAVDGLTFDLTPGRTLALVGESGCGKTTAGKGILQ
LTIPTGGSIRYRGEELVGLGHRRMRPFRKDLQIIFQDPYAAMNPRMLVGDLIGEGLQALG
IERSRAGRMRRVAELLDLVGMDADAVERYPHEFSGGQRQRICIARALAVEPKLIVCDEPT
SALDVSVQAQILNLLKDLQDRLGLAYLFITHDISVVAYLAHEVAVMYLGRLVERGRVDEI
LDDPRHPYTRALLSAVPVIDREKRRAVIRLEGDMPSPSNPPSGCYFHPRCPEAVAACALA
YPEETRLSETRLVHCLRV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgatgtgctgctcgaggtctctgggctgacgacgctgctcggggatgccgcg
cgcccggttcgggtcgtcgacgggatcgacctgacgatccgtcgaggcgaaaccttcgtg
ctgctcggagaatccggatgcggcaagtccatgacggcgctctcgctgatgcggctcctg
ccgccgtccgggcgcgtcgcggccggcgcggtgcgcttggccggaaccgatctgctgcgc
ctgaccgaggccgagatgcgccacgtgcgcggcgggcgcatggcgatgatctttcaggag
ccgcaaacctcgctcaacccggtcatgagcgtcggcgatcagatcgccgaggcggtccgg
gtccatgaagggggatcgcgcgatcgcacaccggcgcgggtcgtggagctgatgcgtgcg
gtcggcatcccggatccggcccggcgggtcgatgaatatccgcatcagctctcgggcggc
atgaagcagcgcatcatgatcgccatggccttggccggcgacccgcagctcctgatcgcc
gacgagccgaccaccgcgctggacgtcaccatccaggcccaggtgcttcggctgttgaag
gatctgcaggcgaagaccggcatggccgtgctcctcatcacccacgatctcggcgtggtc
gccgagacggcggaccgcttggccgtgatgtacgcgggccagatcctggagaccgcgacc
accgatgccttcttcgcggcgccggcgcatccctacagccgccgcttgatggagagcctg
cccggtgcggacaaacgcaacgggcgtctggcggtcatcccgggacgggtcccgcatctg
gaccaggcgttcgtcggctgccggttcgccgagcgttgtgatgcggtcatgccccgatgc
cgtgaacaagcgcccgtctggcgcgacctggtgaccgggcagggcgtgcgctgtcatctc
tgggaccagggcggcgcacagcccgttggattgacgcgcggggtccgggatcccgttgca
gcgcccgagaccatgctcgacggcgaaggcgcgccggatccggaagccgccgttgccccc
atgcttcaggttcgggatctcaaggtccacttcccgatccacgacggcgtcttccggcgt
gtcgtcggacaggtgcgcgccgtcgacggtctgaccttcgacctgaccccgggtcggacc
ttggcgttggtcggggagtccggctgcggcaagaccaccgccggcaagggcatcctgcag
ctgacgatacccaccggcggctcgatccgctatcggggcgaggagctggtcgggctgggg
catcgccggatgcgtcccttccgcaaggatctccagatcatcttccaggatccctatgcg
gcgatgaatccgcgcatgctggttggggatctgatcggcgagggcctccaagcgctcggg
atcgagcgcagtcgggccggacggatgcggcgcgtcgccgagctcctcgatctggtcggc
atggacgcggatgccgtcgagcgctacccgcacgagttctccggcggccagcgacagcgt
atctgcatcgcccgggcgcttgcggtcgagcccaagctgatcgtctgcgacgagccgacc
agcgcgctggacgtctcggtccaggcccagatcctcaacctgctgaaggatcttcaggat
cggctcgggctcgcctatctcttcatcacccacgacatctcggtggtggcctatctggcg
cacgaggtggcggtcatgtatctcggacgcctggtcgagcgggggcgggtcgacgagatc
ctggatgacccgcgccatccctatacccgtgcgctgctttcggccgtacctgtgatcgac
cgcgaaaagcggcgcgcggtgattcgtcttgaaggcgacatgccctcgccgagcaacccg
ccctcgggctgctacttccacccgcgttgcccggaggcggtcgcggcctgcgccttggca
tatcccgaggagacgcgcctgagcgagacccgtctcgtccattgcctgcgggtctga
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