Thiocapsa sp. M50B4: KFB96_24225
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Entry
KFB96_24225 CDS
T07253
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim03030
DNA replication
thim03430
Mismatch repair
thim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFB96_24225 (dnaX)
03430 Mismatch repair
KFB96_24225 (dnaX)
03440 Homologous recombination
KFB96_24225 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thim03032
]
KFB96_24225 (dnaX)
03400 DNA repair and recombination proteins [BR:
thim03400
]
KFB96_24225 (dnaX)
Enzymes [BR:
thim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFB96_24225 (dnaX)
DNA replication proteins [BR:
thim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFB96_24225 (dnaX)
DNA repair and recombination proteins [BR:
thim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFB96_24225 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_18
AAA_14
AAA_30
AAA_2
nSTAND3
TsaE
PIF1
Mg_chelatase
AAA_24
AAA_28
Rad17
AAA_19
ABC_tran
SKI
IcmW
AAA_lid_RFC1
Herpes_Helicase
RNA_helicase
NTPase_1
NACHT
Motif
Other DBs
NCBI-ProteinID:
QVL48638
LinkDB
All DBs
Position
5327686..5329410
Genome browser
AA seq
574 aa
AA seq
DB search
MSYQVLARKWRPKSFDDLVGQSHVVRALSNALDRDQLHHAYLFTGTRGVGKTTLARILAK
ALNCEEGVSARPCGVCSSCREIDGGRFVDLIEVDAASRTKVDQTRELLDNVPYAPARARY
KVYLIDEVHMFSNHSFNALLKTLEEPPPHVKFLLATTDPQKVPVTVLSRCLQLNLRRLLP
EEIRARLQHVLEAEGLEFQASALPLLARGADGSMRDGLSLLDQAIAFGGGRVEESGVRTM
LGTLPGDLTLDLLDALAAGDGARVLAEVERVASLTPDFEELLRELIALLHRLALLQQVPE
TLAPDDPDAARLKALAGGLPAEDLQLYYQVALTGQGDLPLAPDPRAGFEMVLLRALAFRP
GANRDEPTRAPTRPTTQRESVPGGATRLAESAGGAAGSPLASPLSSQVSMLRPVAEPRVA
EPAPPQRAAAATHAPTEIAGAARAVVLTSHADWLALVDRLELGGIASQIAHHCDLKGWAD
GRLSLGLDPAAEHLRSPGAESRLHAALEKTMGTAVKLDIQVARPQRETLAQRRERETGER
RQAAVSAMEEDPIARAMQDELDASWIAGSIEPAD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcctaccaggtgctcgcccgcaaatggcgccccaagagcttcgatgatctggtcgga
caatcgcatgtcgtccgcgcgctctccaatgcgctcgatcgcgaccagctccatcatgcc
tatctctttaccggcacccgcggtgtcggcaagaccacgcttgcccgcatcctcgccaag
gcgctgaactgcgaggagggtgtgagcgcgcgtccctgcggggtttgctcgtcctgtcgg
gagatcgacggcgggcgtttcgtggacctgatcgaggtcgatgccgcctcgcgcaccaag
gtcgaccagacccgcgagctgctcgacaatgtcccctatgccccggcccgtgcacgctac
aaggtgtatctgatcgacgaggtacacatgttctccaaccacagcttcaacgccttgttg
aagaccctggaggagccgccgccgcatgtgaagttcctgctcgcgaccaccgacccgcag
aaggtcccggtcacggtgctctcgcgttgtctgcaattgaatctgcgccgcctcttgccg
gaggagatccgcgcccggctccagcacgtcctggaggccgaggggcttgagtttcaggcc
tccgcactgcccttgctggcccgcggggccgacggcagcatgcgcgacggcttgagtctg
ctcgatcaagcgatcgccttcggcggcgggcgggtcgaggagtcgggcgtgcgcaccatg
ctcggaaccctgccgggtgatttgacgctggacctgctcgatgcgttggcggcgggcgac
ggggcgcgtgtcctggccgaggtcgagcgcgtggcctccctcacgccggatttcgaagag
ctgttgcgcgagctgatcgcgctgctgcaccgcttggcactgcttcagcaggtacccgag
acgttggccccggacgacccggatgccgcacgcctgaaggcgctggcaggcgggctcccg
gccgaggaccttcaactctattatcaggtggctctgaccgggcaaggcgacctgccgctc
gcccccgatccgcgtgccggtttcgagatggtcctgctgcgcgccttggcgtttcggccg
ggcgcgaatcgggacgaaccgacgcgagcgccgacgcgccccacgacacagcgcgagagc
gtgcccggcggtgcgacgcgcctggccgagtccgccggcggtgcggccggctcgccattg
gcctcgccattatcctcgcaggtgtcgatgctcaggccggttgccgagccgcgcgtcgcc
gagcctgcaccgccgcagcgtgcggcggccgcgacccatgcgccgaccgagattgcaggc
gccgcgcgtgcggtcgtgctcacctcgcacgccgattggctcgcgctcgtcgatcgtctg
gagttgggcgggattgcaagccagatcgcccaccattgcgatctgaaaggctgggcggac
gggcggctctcgctcggcttggacccggccgcggagcatctgcgctcgccgggtgcggaa
tcgcgcctgcacgccgccctggaaaagaccatggggacggccgtgaagctcgatatccag
gtcgcccggccgcagcgcgagaccctggcccagcgacgcgagcgcgagaccggcgagcgt
cgccaggcggcggtctccgcgatggaggaggacccgattgcgcgcgcgatgcaggacgag
ctcgacgcgagctggatcgccgggagtatcgagccggcggattga
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