Thiocapsa sp. M50B4: KFB96_25725
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Entry
KFB96_25725 CDS
T07253
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim03420
Nucleotide excision repair
thim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KFB96_25725
03430 Mismatch repair
KFB96_25725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thim03400
]
KFB96_25725
Enzymes [BR:
thim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KFB96_25725
DNA repair and recombination proteins [BR:
thim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KFB96_25725
MMR (mismatch excision repair)
Other MMR factors
KFB96_25725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QVL48891
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All DBs
Position
5623830..5626088
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AA seq
752 aa
AA seq
DB search
MRYTDEQLRAIEHSGGHSLTFAVAGSGKTQMLIGRVRFLLEQGVPPERIRVLAFNKAAAR
EFKERLALALPASFQAPKVSTFHSLGLRLITLFERHGFLPRLRLEENEAVEKRLVREAAL
AAIKEEHADDYPSQDDLEALRTFIGLVKSDIRTPRDAFNAFRIPGNYGYFIRAFDRFETA
RIGAGLRFFADLLSEPARLMMTHPDALALVTNKLDLVVVDEFQDVSRIQVELLVRLIGTR
ATLNAVGDDSQCIYAWRGSRPEFMGEEFDRFFPGATRYTLSRTFRFGHRVALAAGMLIEN
NRNRVPTLCVSAPSTPETGIEVIRADAAGDQSAVVDVIDRWRGDGRRLRECAVLARLWAQ
TLGLELALMDRGIPYFKPKGDVLTDREVVGLLGWLRLAAGSLFADARAPEIIGAMLTTPT
LWLPAKTIADLAETIARHPERAHTRLLEVAAQTRKPYQAGKIRDRAELWSEAPSWSGLPA
AEALRLYALRTDLTESFARSVSSDAASEKEIAYRTLLGAALRTRASIRDFLTHLDALGQT
RRRDEAGGDVVLLSTIHQAKGLEWPLVIAAGLEEGQFPSERSDPEEERRLAYVAFTRAKE
QLVLVIPPDERFDAAWKGRESRGPGISRTPASRFVFEARLRTAVSLGDAVSKRLSGADRE
VKLPDAPADASGLLNRYLEAVGIPERYAVPKAHPKASSGDGSPRWAVNDRIRHRVFGEGR
IVRVRDKDVLDIDFSGRRRSIKLGIVALERIG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacaccgacgaacaactccgggccatcgagcacagcggcggccactcgctgacc
ttcgcggtcgccggctcgggcaagacgcagatgctgatcgggcgggtgcgtttccttctg
gagcagggggtcccgcccgagcgcatccgcgtgctggccttcaacaaggccgctgcacgc
gaattcaaagagcgcctggcgttggccttgccggcgtcgtttcaagcgccgaaggtctcg
accttccacagtctcgggctgcgcctgatcacgctcttcgagcgacacgggttcctgccg
cgcctgcgcttggaggagaacgaggctgtcgagaagcggctcgtgcgggaggcggccttg
gcggcgatcaaagaggagcacgccgacgactacccgagccaagacgacctggaagccttg
cgcacctttatcggcctggtgaaatcggacatccgcacgccgcgggacgcgttcaatgcc
ttcaggattccgggcaactacggctatttcatccgcgccttcgatcgcttcgagacggcc
cgaataggggccggtctgcgcttcttcgcggacctcctgtccgagcccgcgaggctcatg
atgacgcatccggacgcgctcgcgctggtcaccaataaactcgacttagtggtcgtggac
gagtttcaggatgtcagtcgcatccaggtcgagttgctcgtccggttgatcgggacccgt
gcgaccttgaacgcggtcggcgacgattcccaatgcatctacgcctggaggggttctcgt
ccggaattcatgggtgaggagttcgaccgattctttcccggtgcaacccgctacacctta
tccagaacctttcgcttcgggcatcgcgtcgcgctcgccgccggcatgctgatcgagaac
aaccgcaaccgggtgccgaccctctgcgtatcggcgccgtccacgccggagaccggaatc
gaggtgattcgcgccgacgcagcgggcgatcagtccgcggtcgtcgacgtcatcgaccgc
tggcgcggcgacggtcgccgtctgcgcgagtgtgccgtcctcgcgcgactctgggcgcag
accctggggcttgagttggcgctcatggatcgcgggatcccctacttcaagccgaagggc
gacgtcttgaccgaccgcgaggtcgtcgggcttctcggctggctgcgactggccgcgggt
tcgctcttcgcggatgcgcgtgcgccggagatcatcggcgcgatgctcacgacccccacg
ctgtggctccccgcaaagaccatcgccgatctcgccgagacgatcgcccgacaccccgaa
cgcgcgcacacgcgcttgctcgaggtggcggcgcagacccgcaagccttatcaggcgggg
aagattcgcgatcgcgccgaactctggagcgaggccccgagctggagcggcctgcctgcg
gccgaggcactgcggctgtacgccttacggaccgatctgaccgagtccttcgcgcgctcc
gtcagcagcgacgcggcatctgagaaggagatcgcctaccggactctgctcggagcggcg
ctgcgcacccgtgcgtcgatacgcgactttctgacgcatttggatgcgttgggccagaca
cggcggcgcgacgaggccggcggggacgtggtcctgctctccacaattcaccaagcgaag
gggttggagtggccgctggtcatcgccgccggactcgaggaaggccagttcccgtccgag
cgatccgaccccgaagaggaacgacgcctggcttacgtggccttcacccgcgccaaggaa
cagctggtcctcgtcatcccgcccgacgagcgcttcgatgcggcatggaaaggccgcgag
tcgcgcggccccgggatctcgcgcacgccggccagccggtttgtcttcgaagcgcgactc
cggaccgcggtgtcgctcggggacgccgtgtccaaacggctctccggagcggatcgggag
gtcaagctccccgatgcaccggccgacgcgagcggccttctgaatcgctatctggaggcg
gtcggtatccccgaacgctatgccgtgccgaaggcccacccgaaggcgtcgagcggggat
ggctcgccgcggtgggcggtcaacgatcggatccggcatcgggtgttcggcgagggccgg
atcgtccgcgtgcgcgacaaagacgttctcgacatcgacttttccggacggcgccgctcg
atcaagctcggcatcgtcgcgctggagcggatcggctga
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