Thiocapsa sp. M50B4: KFB96_26130
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Entry
KFB96_26130 CDS
T07253
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim02024
Quorum sensing
thim03060
Protein export
thim03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KFB96_26130 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KFB96_26130 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KFB96_26130 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
thim02044
]
KFB96_26130 (ffh)
Enzymes [BR:
thim01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KFB96_26130 (ffh)
Secretion system [BR:
thim02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KFB96_26130 (ffh)
Eukaryotic Sec-SRP protein
KFB96_26130 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
cobW
AAA_30
AAA_16
AAA_33
AAA_19
NACHT
T2SSE
KTI12
nSTAND3
APS_kinase
NTPase_1
AAA_14
AAA_31
AAA_28
Herpes_ori_bp
YqeC
ArsA_ATPase
ABC_tran
Thymidylate_kin
AAA_17
ATP_bind_1
Prefoldin
AAA_24
Fer4_NifH
DO-GTPase1
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QVL48960
LinkDB
All DBs
Position
5707421..5708809
Genome browser
AA seq
462 aa
AA seq
DB search
MFENLQDRFGDVLNNLRGQGRLTEENIKETVRQVRMALLEADVALPVVRQFVEDVREKAL
GETVTRSLTPGQVMIKIVNDELVTLMGQSNEQLDLTAQPPAVVLMAGLQGSGKTTSVAKL
ARWLQEKQGKSVMVVSCDVYRPAAIEQLKTVAAEVGAEFYPSTPDQNPIEIAKRALDAAR
KRFKDVLIVDTAGRLHVDSAMMDEIKAIHAALKPIETLFVVDAMTGQDAANTAKAFDAAL
PLTGVVLTKTDGDARGGAALSIRHITGKPIKFLGTGEKTTALEPFYPDRVASRILGMGDV
VSLVEEVQAKVDKDKAERLVKKLKKGKEFDLVDFKEQLDQMASMGGMMSLMDKLPGMGQI
PDHVKNKASDKEMGKLIAIINSMTPQERRFPAVIKGSRKRRIATGSGTEVQDVNRLLKQF
AQMQKMFKKMKGGGMAKMMRSMQGRMPGGFPPGGMPPGGFPM
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatctccaggatcgtttcggcgatgtcctgaataatctgcgcggtcagggt
cgtctgaccgaagagaacatcaaagaaaccgtccgccaagtgcgcatggcgctcctggag
gccgacgttgcactcccggtggtgcgacagttcgtcgaggacgtgcgcgagaaggcgctc
ggcgagaccgtgacccggagtctgacgccgggtcaggtcatgatcaagatcgtcaacgac
gagctggtcacgctgatgggccagtccaacgagcagttggacctgaccgcgcagccgccg
gccgtggtgctcatggcgggcctgcagggctcgggtaagacgaccagtgtcgccaagctc
gcgcgctggctgcaggagaagcagggcaagtcggtgatggtcgtgagctgcgacgtctat
cgcccggccgccatcgagcagttgaaaacggtcgcggccgaggtcggggccgagttctat
ccgagcacgccggatcaaaacccgatcgagatcgccaagcgcgcgctcgatgcggcgcgc
aagcgcttcaaggatgtcctgatcgtcgacaccgccggccggttgcatgtcgactcggcc
atgatggacgagatcaaggcgattcatgccgcgttgaagccgatcgagaccctcttcgtc
gtggatgccatgacgggtcaggatgcggccaatacggcaaaggccttcgacgcggccctg
ccgctcaccggcgtggttttgaccaagaccgacggcgatgcccgcggcggtgcggccctc
tcgatccgccacatcaccggcaagccgatcaagtttctgggcaccggcgagaagaccacg
gcgctcgagcccttttatccggatcgtgtcgcctcgcgcatcttggggatgggcgacgtg
gtgtccttggtcgaggaggtccaggccaaggtcgacaaggacaaggccgagaggttggtc
aaaaagctcaagaagggcaaggagttcgatctcgtcgatttcaaagagcagctcgatcag
atggcgagcatgggcggcatgatgagcctcatggacaagctcccgggaatggggcagatc
cccgaccatgtgaagaacaaggcgagcgacaaagagatgggcaagttgatcgccatcatc
aactcgatgacgccgcaggagcgccgttttccggccgtcatcaagggttcgcgaaagcgt
cgtatcgccacgggatcaggtaccgaggtgcaggacgtgaaccgcctgctcaagcagttc
gctcagatgcagaagatgttcaaaaagatgaagggcggcggcatggccaagatgatgcgc
tccatgcaggggcgcatgcccggaggctttccgccgggcgggatgccgccgggtggtttt
ccgatgtag
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