Thiocapsa sp. M50B4: KFB96_26140
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Entry
KFB96_26140 CDS
T07253
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFB96_26140 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thim03019
]
KFB96_26140 (pcnB)
Enzymes [BR:
thim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KFB96_26140 (pcnB)
Messenger RNA biogenesis [BR:
thim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KFB96_26140 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QVL48961
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All DBs
Position
5709491..5710858
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AA seq
455 aa
AA seq
DB search
MQEPFQNTSSDAIAATPLIVPRPEHGISRANISENALKVLYRLKQENFQAHLVGGGVRDL
LLGHEPKDFDVATDATPEEVRQVFRNCRLIGRRFRLAHVHFGREIIEVATFRGTTTSDGD
ENDRQMENGRILRDNTYGTIAEDALRRDFTVNALYYNIADFSLIDYADGLEDIKAGRLRL
IGDPEQRYREDPVRMLRAVRFACKLGFTIEQQTEQPLFELAHLLADIAPARLFDELIKLF
HSGYGLGVFEKLRQYGLFGELFPATEDCLAREDHGFPLTFVSRGLANTDKRLHEDKSVTP
AFLFGVLLWEPVRRRFEEYLAGGEAANEAMFLAASEICSQQQSLVAIPKRFSLPMREIWS
MQPRLEQRDGKRPQRLVTHPRFRAAYDFLVLRAEAGEADPELAAWWTRFQEASGQERATM
TEGGAKRRRRRPRRRKTGDTAGPGTEARGGVESGG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacctttccaaaacacgagctcggacgcgatcgcggcgacccctttgatcgtg
cctcggcccgagcacgggatctcgcgcgcgaacatcagcgagaacgcactcaaggtgctc
taccgtctaaaacaagagaattttcaagcccatttggtgggtggaggggttcgagacctt
ttgcttggtcacgagccgaaggatttcgacgtggcgaccgacgcgacccccgaagaggtc
cgtcaggtctttcgcaactgtcgtctgatcgggcggcgctttcgtttggcgcatgtccat
ttcgggcgcgagatcatcgaggtggcgaccttccgcgggactacgacctcggacggcgac
gagaacgaccggcagatggagaacggtcggatcctccgggacaacacctacggcaccatc
gccgaggacgccctgcgccgggatttcacggtcaatgcgctctactacaacatcgccgat
ttttcgctcatcgattacgccgacgggctcgaggacatcaaggccggtcggctgcgtctg
atcggcgatccggagcagcgctatcgcgaggacccggtgcggatgctccgggcggtgcgc
tttgcctgcaagctgggcttcacgatcgagcagcagaccgagcagccgctgttcgagctc
gcccatctgctcgccgacatcgccccggcgcgactcttcgacgagctgatcaagctcttt
cattcggggtacggcctcggcgtcttcgagaagctgcgccagtacgggctcttcggcgag
ctgttcccggcgacggaggactgcttggcgcgggaagatcatggattcccccttaccttc
gtcagtcggggtttggccaataccgacaagcggctgcacgaggacaagtccgtgacaccg
gccttcctgttcggcgtgctcctctgggagccggtcaggaggcgtttcgaggagtatctg
gccggtggggaggccgccaacgaggcgatgttcctggcggcgagcgagatctgttcgcag
cagcaatcgctcgttgcgattccgaagcgattctcgctgccgatgcgcgagatctggtcg
atgcagcctcggctcgagcagcgtgacggcaagcgtccgcagcgcctggtgacgcacccg
cgattccgggccgcttacgacttcctggtcctgcgcgcggaggccggcgaggccgatccg
gagctggcggcctggtggacgcgttttcaggaggcgagcggacaggagcgcgcgaccatg
accgaagggggcgcgaaacggcgtcggcggcgtccgcggcggcgcaagacgggagatacc
gcaggtcccgggacggaggcgagggggggcgtggaaagcggcggctga
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