Thiocapsa sp. M50B4: KFB96_26190
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Entry
KFB96_26190 CDS
T07253
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
thim
Thiocapsa sp. M50B4
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thim01002
]
KFB96_26190
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thim01011
]
KFB96_26190
Peptidases and inhibitors [BR:
thim01002
]
Cysteine peptidases
Family C82
KFB96_26190
Peptidoglycan biosynthesis and degradation proteins [BR:
thim01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KFB96_26190
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QVL48971
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Position
5723672..5725477
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AA seq
601 aa
AA seq
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MRLGLVGLLLLLVVVSAPASTEGLLRPTLDAIRDARTVAVEGVPLLSGRLLSELYAQRGD
VLVWVEPAPISDLLDLAQRSVSEGFRPEDFHVEHLRRLAAPGALESLTGNTRLAADLVLS
DALARYVHHHRYGKLDPVAVDSKWHDRSPVSSEVILADMTRALDGDDLAGSLSERISRPF
WYEDLKKALQRYTAQTSLVGLPPLPAGSNLALGSRHPRVAMLRERLARIDGAAVSEAFDA
DLFDTALNEAVLSFQRRSGLTADGVVGPSTLAALNGHSDETKAEQIRINLERMRWLYHDL
PEDYVFVDVAAFKVHLARGGSFVWSTRVIVGTPETQTHMFRDTMDHLVFNPTWTVPVSIQ
KKMGRVSADYRLVDRRTGKQVGGGNAGDYTRYRLVQAPGPKNALGRVKFMFPNRHAIYLH
DTPGKAAFARQARALSNGCVRVQDPLDLAEAILDQPNWDQSGIERVVERGRTRYVDLADT
LPVLLYYLTAFADAQGQVGFRQDIYGRDEALRAAFSSPVLRTRIGFPEPPAESPSPNLSP
EKPERAPDVEPPNPSDKDTSVRLTGRDSTEGQGDGRGSGTDGSDPAVSTLDRPEARPTGR
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgggtttggtcggtctattgttgctcttggtcgtcgtttctgctccggcgtcc
acggaggggttgctgcgcccgacgctcgatgcgatccgggatgcgcgaaccgttgccgtc
gagggcgtgccgctcttgtccggtcgtctgctgtctgagctctacgcgcagcgcggcgat
gttctggtctgggttgagccggcgccgatctcggatcttttggacctcgcgcagcgcagc
gtgtccgagggcttccggcccgaggatttccatgtcgagcatctccggcgactcgcggcg
ccgggtgcgctcgaatccctgaccggcaacacacgtctcgcagccgatctcgtcctcagc
gatgccttggcacgctacgttcaccaccatcgctacggcaagctcgatccggttgctgtc
gattcgaaatggcacgacagatctcctgtgtccagcgaggtcatcctggccgacatgact
cgggcgctcgacggcgatgatctcgcgggcagcctgagcgagcgtatctcgcgcccgttt
tggtatgaggacctgaagaaggcgctgcagcgctacaccgctcagacctcgcttgtggga
ctgccgcccctgccggccgggtcgaatctggccctaggcagccggcatccgcgcgtcgcg
atgctgcgcgagcgtctggcgcggatcgatggcgcggcggtctcggaggcattcgatgcc
gatctgttcgacaccgcactcaacgaggccgtgctgtcgttccagcggcgatcggggctg
acggccgacggtgtcgtgggtccctcgaccctcgcggcgctcaacgggcacagcgacgag
acgaaggccgagcagatccggatcaatctggagcggatgcgctggctctatcatgacctg
ccggaagactacgtgttcgtcgatgtggctgcgttcaaggtccacctggcgcgcggcggg
agcttcgtgtggtcgacgcgtgtcatcgtcgggacgcccgagacccaaacccacatgttt
cgcgacaccatggaccacttggtcttcaatccaacctggaccgtgcccgtgtccatccag
aagaagatgggcagggtctcggccgattatcggttggtcgatcgacgaaccgggaagcag
gtcggcggcgggaatgccggtgattacacgcgttatcggcttgtccaggcgccgggtccg
aaaaacgccctcggccgcgtcaagttcatgtttccgaaccgccacgcgatctatctccac
gacacgcccggaaaggctgcgttcgcgcgccaagcacgggccttgagcaacggctgcgtc
cgagtacaagacccgctggaccttgccgaggcgatcctcgatcagcccaactgggatcag
tccgggatcgagcgcgtggtcgagcgcggacggacgcgctacgtcgacctcgcggacacc
ctgccggtgttgctctactatttgacggcctttgcggacgcgcaaggtcaggtgggcttt
cgccaggatatctacggacgcgacgaggcgttgcgtgctgccttctccagtccggtcctg
cgcacgcgcatcggcttccccgagcctccggccgagagcccgagcccgaacctgagcccg
gagaagcccgagcgggcaccggatgtcgagcctccgaatccgtccgacaaagacacatcg
gttcgcctcaccggccgggattccaccgaaggccagggcgacgggcgtgggtccgggacc
gatggttccgaccctgccgtctcgaccctcgatcgccccgaggcgcgccccacaggtcgg
ctctga
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