Candidatus Thioglobus sp. NP1: CRN91_00375
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Entry
CRN91_00375 CDS
T05818
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
thin
Candidatus Thioglobus sp. NP1
Pathway
thin03030
DNA replication
thin03430
Mismatch repair
thin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRN91_00375 (holA)
03430 Mismatch repair
CRN91_00375 (holA)
03440 Homologous recombination
CRN91_00375 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thin03032
]
CRN91_00375 (holA)
03400 DNA repair and recombination proteins [BR:
thin03400
]
CRN91_00375 (holA)
Enzymes [BR:
thin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CRN91_00375 (holA)
DNA replication proteins [BR:
thin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CRN91_00375 (holA)
DNA repair and recombination proteins [BR:
thin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CRN91_00375 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AXE61160
UniProt:
A0A344W6X5
LinkDB
All DBs
Position
59689..60708
Genome browser
AA seq
339 aa
AA seq
DB search
MNIKPEQLSNNLASGIKPIYFVFGAEILLVEQSLTLIKDFAKEQGFSERTRFDIDGNFSW
DAIFGLIASPSLFAEKRIIECRLTTGKIGIKGSKALAELTEILPDDILLIISTGKLDIAQ
QKSKWFKALDKNGVTIQHWEVQSDQLVGWLLNQMRQLGLNQNNDVANAIAYATEGNLLAA
MQEIQKLQIAYPDGNIAADQYLNQIDQQSQYSVFGLIDAALKGDSIKVNKIFNFLEDDAS
PPVIIISSLYREIKSLATMSIELKQNQKIDAIFNNHRVWQKRKPLVSNALKMHSYQKLQK
LLLTLGRIDRSVKGMDNLNVYDELRSVVITLSGKNQWTQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaaacctgaacaactctcaaataaccttgcaagcggtattaagccaatttat
tttgtgtttggagcagaaatactattagttgaacaatccttaacattaattaaagatttt
gcaaaagaacaaggctttagtgaacgcactcgatttgatattgatggtaatttttcttgg
gatgcaatctttggcctaattgcaagtccatcactttttgctgaaaaacgaatcattgag
tgccgactcacaactgggaaaattggtattaaaggatctaaagctctcgctgagctaact
gaaattctgccagatgatattttgctaataatttctacaggcaaactagatatagctcag
caaaaaagtaagtggtttaaggcattagacaaaaatggggttaccattcagcactgggaa
gttcaaagtgatcaacttgtagggtggcttcttaatcaaatgagacagctaggcttaaat
cagaataatgatgttgcaaatgcaatagcttatgctaccgaaggaaatcttttagcagca
atgcaagaaattcaaaaacttcaaattgcttatccagatggtaatattgctgccgatcaa
tatctaaatcaaattgatcagcagtcacaatactcagtctttggcctaattgatgctgct
cttaagggtgattctattaaagttaataaaatttttaactttcttgaggatgatgcatca
ccaccagtaataatcatttcatcactctaccgcgaaataaagtcattagctacaatgtca
atcgaactcaaacaaaatcaaaaaattgatgcaatctttaataatcatagagtttggcaa
aaaagaaagccattagtctcaaatgctttaaaaatgcatagttaccaaaaacttcaaaaa
ttacttttaacgcttggacgtattgaccgctctgtaaaaggcatggataatcttaatgtt
tatgatgaattacgaagtgtcgtaattactttatcgggtaaaaatcaatggactcaataa
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