Candidatus Thioglobus sp. NP1: CRN91_03875
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Entry
CRN91_03875 CDS
T05818
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
thin
Candidatus Thioglobus sp. NP1
Brite
KEGG Orthology (KO) [BR:
thin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thin03009
]
CRN91_03875
Enzymes [BR:
thin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CRN91_03875
Ribosome biogenesis [BR:
thin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CRN91_03875
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
RrnaAD
Methyltransf_31
TRAM
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Cons_hypoth95
Methyltransf_15
DOT1
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AXE61811
UniProt:
A0A344W8S6
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Position
749867..751189
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AA seq
440 aa
AA seq
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MARRRKLKEKIYELDIESLSHEGRGISHYDNKIIFTRGALPGEKVIASRSLSRSKYEEAD
MIEILEKSPDRIKAKCEVYGVCGGCSFQHLSSENQISVKESWLKSAFMGQAKSAPKKWLN
PLQVDSWGYRRKARLGVRYVAKKEKVLVGFRERKSSFITVMSRCEVLHPSLGENLELLGE
CIGKLSIKTHVPQIEVAIAELDTILILRHLEPLTKEDEVILKEYGDKLAITWYTQSGGLD
TVRPLIDNINLTYSIKDHNIEMTFLPNDFTQVNFEINQKMINLAIDLLELDADDEVIDLF
CGLGNFTLPISRYVKRVVGIEGDKGLVERAKSNAIMNAITNTSFYKADLFDDVSGSEWFR
GQKYNKALIDPARTGAIEIVELLPKLGVEHLVYVSCNPATLARDTARLIELGFNLMSAGV
MDMFPQTAHVESIAVFKRKK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctagaagaagaaaactcaaagaaaaaatctatgaactagatatcgaatccttgtct
catgagggtaggggtatttctcattatgataataaaatcattttcactcgtggcgcactc
cctggtgagaaagttattgcatctcgctctctttctcgatcaaagtacgaggaagcagac
atgattgaaatacttgaaaaatcacctgatagaattaaagcaaagtgcgaagtttatgga
gtatgtggaggatgttcttttcaacacctttcttcagaaaatcaaattagtgttaaagag
agctggctaaaaagtgcttttatgggtcaagcaaaaagtgcaccaaaaaaatggctaaat
ccacttcaggttgatagttggggttatcggcgaaaagctcgattaggggttcgctatgta
gcgaaaaaagaaaaagtgcttgtaggctttcgtgaaaggaagtcctcatttattacagta
atgagtcgctgtgaggttcttcatccatcacttggtgaaaatcttgagctactaggagag
tgtattggtaagttaagtatcaagacacatgtccctcaaattgaggttgctattgctgaa
ttagatactattctaattctaaggcatctcgaaccattaactaaagaagatgaagttatt
cttaaagaatatggagataagctggctatcacttggtacactcagagcggtggtttagat
actgttaggcctttaattgataacataaatttaacttattctattaaagatcacaatatt
gagatgacttttttgcctaatgactttactcaggtaaactttgaaattaaccaaaaaatg
atcaatttagcaattgatttattagaattagatgctgatgatgaagtaatagaccttttc
tgtgggttaggcaactttaccctaccaatttctcgatatgttaaaagggtagttggtata
gaaggggataagggtttagtagaaagggctaaatcaaatgccataatgaatgctattact
aatacctctttttataaggcagacctttttgacgatgtctcaggctctgaatggtttagg
ggtcagaagtataacaaagctcttatagatccagcaagaactggtgcaatagaaatagta
gagctgcttccaaagttaggtgttgagcatttagtctatgtttcatgcaatcctgctact
ctagcgagagatactgctcgattaattgaattagggtttaatttgatgagcgcaggggta
atggatatgtttccacaaacagcccacgtggagtcaattgctgtctttaaacgtaaaaaa
taa
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