Candidatus Thioglobus sp. NP1: CRN91_03885
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Entry
CRN91_03885 CDS
T05818
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thin
Candidatus Thioglobus sp. NP1
Pathway
thin03420
Nucleotide excision repair
thin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CRN91_03885
03430 Mismatch repair
CRN91_03885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thin03400
]
CRN91_03885
Enzymes [BR:
thin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRN91_03885
DNA repair and recombination proteins [BR:
thin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRN91_03885
MMR (mismatch excision repair)
Other MMR factors
CRN91_03885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXE61813
UniProt:
A0A344W8S8
LinkDB
All DBs
Position
complement(751642..753810)
Genome browser
AA seq
722 aa
AA seq
DB search
MISPPIVDGLNEKQQQSVALDEDINALILAGAGSGKTRVLTHRIHYLVSTKNYHVDDILA
VTFTNKAANEMKERLSDLLRRPIGRMWVGTFHSLAHRLLRTHPIEANLSPTFQILDAQDQ
FRIIKRLMKENGVDETKFPIKKVQWFINQQKDEGILPHEIDAGYNFFVKQSANVFDLYEK
HCQVNDLVDFAGLLVKSYGLLKNNQSLLEHYQNKFRHILVDEFQDTNRIQYQFIKILHNQ
TNHVFCVGDDDQSIYGWRGAKIENIQKIENDFKPIQVIKLEQNYRSTGNILSASNALIAN
NQNRLEKSLWTESGDGDLINVLNARTETEEAQYVVGEIQTQFNQGRNLDECAILYRSNAQ
SRVFEESLIKQNLNYRIYGGLRFFERAEIKDAMGYIRLIENTSDNIAFERIVNFPTRGIG
LSTIEKIRSYANENQTNLFQSSIAIIDSLPSRAANALQSFIHLIEAISDSSKNLILDEKV
DSILLQSGLMSHYANDKSDKAGSKRENLDELVTAATQYVHEEDNEMNETQGFIALATLDS
SGESNQSNQSSVQLMTVHSAKGLEFPVVFLVGLEEDLFPSRQSKDEPHLLDEERRLCYVG
MTRAMKSLTLSYASRRFLHGQSFYSLSSRFLDEIPKSFLNYIKNESTENSYQGYKKNTNV
SNKMIATSDSIYSIGQVVKHAKFGLGTILNYEGSGDSMRLQINFQRAGTKWLISSYANLE
IV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatttctccccctattgttgatggattaaatgaaaagcagcagcaatcagttgcacta
gatgaagatattaacgctctgatcttagcaggtgctggaagtggcaaaacaagggtttta
acgcatcgaatacattatttagtttcaacaaagaattatcatgtcgatgacatccttgca
gttacctttaccaataaggctgctaatgaaatgaaagagcgtttgagtgatcttctcaga
agaccaattggtaggatgtgggttggcaccttccactcacttgctcatagacttctgaga
actcaccctatagaggcaaacctttcgccaacatttcaaattctagatgctcaagatcag
tttcgaattattaaacgcttgatgaaagaaaatggcgtagatgaaacaaaatttccaata
aaaaaagttcagtggtttattaatcaacagaaagatgaaggcatcctccctcatgagata
gatgcaggatacaacttttttgtaaagcaaagtgcaaatgtttttgacctctatgagaag
cattgtcaagtaaatgacttggttgactttgctggcttattggtaaaaagttatgggctc
ttaaaaaataatcaatctcttttagagcattatcaaaataagtttcgccatatcttagtt
gatgagtttcaagatactaatcgaattcaataccaatttattaaaatacttcataatcaa
actaatcatgttttctgtgttggtgatgatgatcagtccatttatggctggagaggagcc
aaaattgaaaatattcaaaagattgagaatgatttcaaaccaatacaagttattaagctt
gagcaaaattatcgatcaactggaaatatccttagtgcttctaatgccttaatagctaat
aatcaaaaccgtcttgaaaagtctctttggacggagtcaggtgatggtgacttgataaat
gtattaaacgcaagaacagaaactgaggaagcacaatatgttgttggtgaaatccaaact
caatttaatcagggtaggaatctagatgaatgcgcgatactctatcgttcaaatgcgcaa
tctcgagtctttgaagaatctctaattaaacaaaatctgaattatagaatctatggtggt
ttacgattttttgagcgagctgaaataaaagacgcaatgggttatatccgacttattgag
aatacttcagacaatatcgcttttgagaggattgtgaattttccaacccgtgggattggt
ctttctacgattgaaaaaattaggtcttatgcaaacgaaaatcaaactaacctttttcag
tcatcaattgctattattgatagcctcccatcaagagcagcaaacgctttacaaagcttt
attcatctaattgaagcaattagtgatagttcaaaaaatcttatacttgatgaaaaagta
gactctatccttttacaatctgggttaatgtctcactacgctaatgataaaagtgacaaa
gcaggaagtaaacgtgaaaatcttgacgaacttgtaactgctgcaacgcaatatgttcat
gaagaagataatgaaatgaatgaaacccaaggttttattgctcttgcaacactagactct
agtggcgagtctaatcaaagtaatcagagttctgttcaacttatgactgtgcattcggca
aaaggactggagtttcctgtagtttttttagtaggcttggaagaggatttatttccttcc
agacaaagcaaggatgagcctcatcttcttgatgaagaaagacgcctttgttatgttgga
atgaccagagctatgaagtctttaacactctcttatgctagtcggcgattccttcatggt
caatctttttattcactaagttctagatttcttgatgaaataccaaagagttttttgaac
tatattaaaaatgaaagcactgaaaatagttaccaaggatataaaaaaaatactaatgta
agtaataagatgattgcgacttcagattcaatttattcaattggtcaggtcgttaagcat
gctaaatttggacttggcactattttaaattatgagggtagtggcgattcaatgcgactg
caaattaattttcaaagagctggaacaaagtggctaattagctcttacgctaaccttgag
atagtttag
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