Candidatus Thioglobus sp. NP1: CRN91_04310
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Entry
CRN91_04310 CDS
T05818
Name
(GenBank) ABC transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
thin
Candidatus Thioglobus sp. NP1
Pathway
thin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CRN91_04310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thin02000
]
CRN91_04310
Enzymes [BR:
thin01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CRN91_04310
Transporters [BR:
thin02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CRN91_04310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_16
MMR_HSR1
DUF87
Dynamin_N
AAA_29
cobW
AAA_14
Zeta_toxin
ATP_bind_1
AAA_25
PRESAN
TsaE
nSTAND3
FtsK_SpoIIIE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AXE62737
UniProt:
A0A344WBF2
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All DBs
Position
complement(840080..841798)
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AA seq
572 aa
AA seq
DB search
MGYTQFVKRLFPYIKNHLGKLFFTSLMMVFATLLETAIPEITGQIVDTLFTSERTSDQAL
FYSLILTSVIAISSFFALISISASSWISNKVILDLRIDMFSKLLKLPKTYFDKNTTGETL
SKLTFDVEQISAAASTIWLQFIKSSFMVVVLIGYLFYKSFLLSLTLIVLLPLVYFAVKFS
SSRIRKGSKSVQESMGKMTHLLDENISGSDLIKIYNAQKNEKNKFFAIINTIRQQRFKVD
MASGLNTSIVNALIGLSLGCVVYFSSTFLVMTAGDFLAFFTAMGMLVKPAKTLININKPL
QQARVSSDSVFKLIDEKSEINTGKHQVDQLEGEIKFDNVSFSYGEDKASLKNINLTIKPG
ETIAVVGSTGSGKTTLVNLLTRFYIPTEGKILINNLEINSFELESFRSNFSFVDQNVRLF
NDTITGNIAFGQKDQMPIESIINAAKVSNSIEFIEKLDDKFESGIGEDGVILSGGQRQRL
SIARAIAKDSPILILDEATSALDSATEKLVQSAINKMQKDRTTIIIAHRLSTIQNADRII
VLKDGSIIEQGTHGELINAAGEYEKLIQQQLK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgggatacacacaatttgtcaagagactttttccatacattaaaaatcatttaggaaaa
cttttttttacctcactgatgatggtttttgctactttattagagacagcaatacctgaa
attactggtcaaatagttgatactttatttacctctgaacgcacaagtgaccaagcctta
ttctattcattaatattgacaagtgttattgctataagctccttctttgccctaatatca
attagtgccagttcttggatctcaaataaagtaatattagatttgagaatagatatgttt
tcaaaacttttaaaacttccaaaaacttattttgataaaaacacaactggagagactctt
tctaaattgacttttgacgttgagcaaatttctgctgcagcctcaaccatatggctccaa
ttcatcaaatcttcttttatggttgtagtattgatagggtatttgttttataaaagcttc
cttttaagccttactcttatagtgcttcttcccttagtttattttgcagtaaagttttcc
tcatcccgaattagaaaaggctctaaaagtgtccaagaatctatgggtaagatgactcac
ctcttagatgagaatatttcaggtagtgacttgattaaaatttataatgcacaaaagaac
gaaaagaataagttttttgcaattatcaataccatccgtcaacaaagatttaaggtggat
atggctagtggacttaatacttcgattgtaaatgcattaattggtttgtctttagggtgt
gtggtttatttttcttcaacatttctagtgatgactgctggagactttttagcatttttt
actgcaatgggaatgcttgtaaagcctgccaagactttaatcaacataaataaacctctt
caacaagcgcgagtttcatctgatagtgtctttaagcttattgacgaaaaatctgaaata
aatactggtaaacatcaagttgatcaactggaaggagaaataaaatttgataatgttagt
ttctcatatggtgaagataaggcctctttaaaaaatataaacctaacaattaaaccaggc
gaaacaattgcagttgttggatctacaggaagtggaaagaccacgcttgtaaacctttta
actcgcttttatatcccaacagaaggcaaaatattaataaataatttagagataaatagc
tttgaattagaatcttttagatctaatttttcttttgttgaccaaaatgtacgtctattt
aatgatactatcacaggaaatattgcatttggacaaaaagatcagatgccaattgagtca
ataattaatgctgccaaagtttcaaactcgattgagtttattgagaaattagacgataaa
tttgaatctggaattggtgaagatggagtaatcctatctggtggacaaagacaaagactt
tcaattgctcgagcaattgcaaaagatagtccaattttaattcttgatgaagcaacatca
gcattagactctgctactgaaaaactagttcagtccgcaatcaataaaatgcagaaagat
agaacaacgattattattgctcatcgcttaagcacaattcagaatgctgatcgtataatt
gttttaaaagatggtagtattattgagcaaggtactcatggagaactcattaatgccgct
ggtgaatatgaaaagcttattcaacagcagcttaaataa
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