Candidatus Thioglobus sp. NP1: CRN91_04545
Help
Entry
CRN91_04545 CDS
T05818
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thin
Candidatus Thioglobus sp. NP1
Pathway
thin03410
Base excision repair
thin03430
Mismatch repair
thin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CRN91_04545 (recJ)
03430 Mismatch repair
CRN91_04545 (recJ)
03440 Homologous recombination
CRN91_04545 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thin03400
]
CRN91_04545 (recJ)
DNA repair and recombination proteins [BR:
thin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CRN91_04545 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CRN91_04545 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CRN91_04545 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AXE61934
UniProt:
A0A344W949
LinkDB
All DBs
Position
880452..882146
Genome browser
AA seq
564 aa
AA seq
DB search
MLSREKDNALYESYSDDIPTLLKKIYASRCVTESQLDMSLPGLLKPNFDQLNIALELLER
AIYEDKKILIIGDFDADGATASAVAIKALRLMGAKYVDFLVPNRFKHGYGLSPEIVNEAK
IEKEPDLIITVDNGISSNDGTALARSFGIDVIITDHHLPPKDLPEANSIINPNLRGCDFP
SKSLAGVGVSFYLFSSLKTHLVAKGYFEKQNIELPDLRELLDLVALGTVADVVKLDQNNR
ILINEGIKRIRQKRCSKGILAILELTKRPVESLQASDLGFTVAPRINAAGRLSDISQGIR
CLLSEDINDARRYALNLEEFNIKRRKEQTRMQDEALAIVEEQLIDESQFAIVLYDETWHE
GVVGIVAGKLKETYQCPCAVFAKADKVLKGSIRSIPDVHIKDLLETVAINNPGLIEKYGG
HAMAAGLSIIPENFKIFKEAFSEAITKHLEGKKPIIELLTDGKLEASEITLKNAELLRQA
SPWGQGFEEPIFYGDFELIEQKIVGEKHLKCTLKLIDNSSIFEGIAFFQEKLKSKKVRVA
YKLNVNSFRGNESLQLMIELMEII
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtgctaagtagagagaaagataatgcattatatgagtcatactctgacgatatacctacg
cttctaaagaaaatatacgcctcaagatgtgtcactgagtctcaacttgatatgtctcta
ccaggactactaaagccaaattttgatcaacttaatattgcccttgagttgcttgaaagg
gctatttatgaggacaaaaaaatcctaattattggtgactttgatgctgacggggctaca
gctagtgcggtagcaataaaggctcttcgattaatgggtgctaagtatgttgattttcta
gtgccaaatcgctttaaacatggctatggactgagccctgagattgttaatgaagcaaaa
attgaaaaggagccagatttaattattacggttgataatggtatttcaagtaatgatgga
actgcgcttgcaagatcgttcggaattgacgtcataattactgatcatcacttaccacct
aaagatcttccagaggccaattcaatcattaatccaaatctaagaggttgtgattttcct
tctaaaagtttagctggtgttggggtatctttttatttgttttcatcattgaaaacccat
cttgttgctaaaggttattttgagaaacaaaatattgaactacctgaccttcgtgagctt
cttgatcttgttgctcttgggactgttgcagatgttgtcaaacttgatcaaaacaataga
attctcatcaatgagggaattaaacgtattcgtcaaaaaaggtgctcaaaaggcatccta
gctatacttgagctaacaaaacggcctgtagagtctctccaagcctctgatcttggtttt
actgttgctccaaggataaatgcagcagggcgactcagtgatatttcacaaggaatacga
tgcttattatcagaggatattaatgatgcaaggagatacgccttaaacctcgaagagttt
aatattaaaagacgtaaagaacagacgcgaatgcaggatgaggcactagctattgtagag
gagcagttgatagatgagagtcaatttgcaatagtactttatgatgagacttggcatgaa
ggtgtggttggaattgttgccggcaagctaaaagaaacctatcaatgtccatgtgccgtt
tttgcaaaagctgataaagtattaaaaggctctataaggtcaataccagatgtacacatc
aaagatttacttgaaacagttgctattaataatccaggattaattgaaaagtatggtggt
catgcaatggctgcaggattatcaattattcctgagaattttaagatttttaaagaggca
ttttcagaggctattaccaagcatcttgaaggtaaaaaaccaattattgagcttctaact
gatggcaaattagaggcttctgaaataacccttaagaatgctgagcttcttcgtcaggct
tcgccttggggtcagggttttgaagagcctattttttatggagactttgagttaatagag
cagaaaattgtaggtgaaaaacatcttaagtgcactcttaagttaattgataatagttct
atttttgaaggaatcgctttttttcaagaaaaactcaaatctaagaaggtcagagttgct
tataaacttaatgtgaactcatttagaggaaatgaatctttacagttaatgattgagcta
atggagatcatataa
DBGET
integrated database retrieval system
