Candidatus Thioglobus sp. NP1: CRN91_06590
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Entry
CRN91_06590 CDS
T05818
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thin
Candidatus Thioglobus sp. NP1
Pathway
thin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRN91_06590 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thin03019
]
CRN91_06590 (pnp)
03016 Transfer RNA biogenesis [BR:
thin03016
]
CRN91_06590 (pnp)
Enzymes [BR:
thin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CRN91_06590 (pnp)
Messenger RNA biogenesis [BR:
thin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CRN91_06590 (pnp)
Transfer RNA biogenesis [BR:
thin03016
]
Prokaryotic type
tRNA degradation factors
CRN91_06590 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AXE62321
LinkDB
All DBs
Position
1284613..1286706
Genome browser
AA seq
697 aa
AA seq
DB search
MNMNIVQKSFTFGKNQITFETGRIARQAHGAVLASMDDTQVLVSVVGAKDARPGQAFFPL
SVDYIEKTYAAGKIPGGFLKREGRPSEKETLTSRLIDRPIRPLFPNGYMNEVQVMIQVIS
ANKNVDPDVLAMLGTSAALAISGVPFKGPIGAARVGFQDGNYIINPTYSDLQTSDLDMVV
AGTKDAVLMVESEASELSEEVMLGAVMYAHEQFQVVIDSVAEFAKEVGISPREWIAPEAN
EALMSDIQSKFGNQISEAYQTVDKMERYEKMGLIKDSALEQLCSDEENSPSSDDVKDYIK
KIEKSTVRERILAGEPRIDGRDSSTVRELAIETSVLENTHGSALFTRGETQALVVTTLGS
KRDAQLIEKLETNDRIEDHFMLHYNFPPYCVGETGRVMGVKRREVGHGRLARRGISACLP
SIEDFPYTIRIVSEITESNGSSSMASVCGSSLSLMDAGVPLRAPVAGIAMGLVKDEDRFT
VLTDILGDEDHLGDMDFKVAGTSKGINALQMDIKIDGITEDIMSIALKQAKEARINILGQ
MNQVISEPNAASKNAPKTKVIKIPTDKIRDVIGKGGETIRGIVAQSGASVDVDDDGNVNV
FANDTESFEKAVQMVKDVTAVPEVDKVYMGKVAKIVEFGAFVTIMPNQDGLLHISEIAHE
RVEKVEDHLKEGQEIEVKVLGVDRGRIKLSRKVLIEK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaatatagttcaaaaaagctttacatttggaaaaaaccaaattacttttgaa
acaggaagaatagctcgtcaagcacatggtgccgttttagcgagtatggatgatacccaa
gtattagtgagcgtggttggtgcaaaagatgccagacctggtcaagccttctttcctctt
tcagttgattacatagaaaaaacgtatgctgcaggtaagattccaggtggcttcttaaaa
agagaaggacgtcctagtgaaaaggaaacactaacctctagattaattgatcgcccaatt
cgtccattatttccaaatggatatatgaatgaagttcaagtcatgatacaagtcatttct
gctaataagaatgttgaccctgatgttttagctatgcttggtacttctgctgctcttgca
atttcaggtgttccatttaaaggcccaattggtgcagctcgagttggatttcaagatggt
aattacattattaatccaacatactcagatttacaaacatcagatcttgatatggttgtt
gctggaactaaagatgcagtcttaatggttgaatcagaagctagtgagctctcagaggaa
gttatgctaggagcagtaatgtatgctcatgagcaatttcaagtagtaattgatagtgtt
gctgagtttgctaaagaggtaggtatatctcctcgtgagtggattgctcctgaagcgaat
gaggccttaatgtcagacattcaatctaagtttggaaaccaaatttccgaagcatatcaa
acagttgataaaatggagcgttatgaaaaaatgggtttaattaaagattcagcacttgag
caactttgtagtgatgaggaaaattcgcctagctcagatgatgtaaaggattatatcaaa
aaaattgaaaaatctacagttagagaacgtattttagccggtgaacctcgaatagatggt
cgcgatagttctactgttcgggagcttgcaattgaaacaagtgtattagagaatacacat
ggttctgctttatttactcgtggagaaactcaggctttagtggtaacaactcttggctct
aaaagagatgctcaattgattgaaaaacttgaaactaatgatagaattgaagaccatttt
atgcttcattacaacttccctccatactgtgtaggtgaaacaggtcgagtaatgggagtt
aaaagacgtgaggttggacatggtcgactagcaagacgaggaatctctgcttgcttacct
agtattgaagattttccatatactattcgtatagtttcagaaattactgaatcaaatggc
tctagctctatggctagtgtttgtggctcttcactttcactaatggatgcaggagttcct
ttaagagcacctgttgctggtattgctatgggactcgttaaggatgaggatcgtttcaca
gttttaactgatatcctaggtgatgaagaccaccttggtgatatggactttaaagtagct
ggaacctcaaaaggaataaatgcacttcaaatggatataaaaattgatggaattacagaa
gacatcatgtcaattgctcttaaacaagccaaggaagcaaggatcaatatacttggacaa
atgaatcaagtaatttctgaacctaatgcagcttcaaagaatgcgcctaaaactaaagta
attaaaattcctactgataagattcgtgatgttattggtaagggtggtgaaactattcga
ggcattgtagctcaatcaggtgcaagtgttgatgtagatgatgatggtaatgttaatgtt
tttgctaatgatactgaaagctttgaaaaagccgttcaaatggttaaggatgttaccgca
gttcctgaggttgacaaggtctacatgggcaaggttgccaaaatcgtagagtttggtgca
tttgtaactatcatgccgaatcaagatgggcttcttcatatttcagagattgctcatgaa
agggtggagaaagttgaagatcatttaaaagaaggccaagaaatagaagtcaaagttcta
ggtgttgatagaggcagaataaaactttcgcgaaaagttttaatagaaaaataa
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